Danio rerio (zebrafish): 797304
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Entry
797304 CDS
T01004
Symbol
smc6
Name
(RefSeq) structural maintenance of chromosomes protein 6 isoform X2
KO
K22804
structural maintenance of chromosomes protein 6
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dre03400
]
797304 (smc6)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
797304 (smc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
ERM_helical
AAA_15
Trans_reg_C
Crescentin
AAA_29
Motif
Other DBs
NCBI-GeneID:
797304
NCBI-ProteinID:
XP_001337776
ZFIN:
ZDB-GENE-110303-1
Ensembl:
ENSDARG00000091821
UniProt:
X1WGQ9
LinkDB
All DBs
Position
17:6667482..6711229
Genome browser
AA seq
1093 aa
AA seq
DB search
MQGNGFGHLSAMNKRKSGVHNAVKPSKTPRTDGKTHVLEEEDVDEEDGALQDHLSASNVG
DIGVIESITLRNFMSHHLLGPLKFGANVNFIVGNNGTGKSAILTALIVGLGGKATTTNRG
TSLKGFVKYGETSTDIKVKLKNRGNDPYKGDVYGDSICIEHRITSDGCRTCKIKNKAGHV
VSTKKEELTAILDHFGIQVDNPVSVLNQEMSKQFLHSKSEADKYRFFMKATLLEQMKRDY
IHIKQTKAVTRDQVERQEECLRDLRQLFLQRKERYERMSSLDDMRQTLEDLKKKMAWSLV
REKESQVEQLKEQIEKEDADCKHEEKLQLCQNKVAVAEKKLQDSQKHLCTLREEQEHLTE
ESRKMKEEIKVKTKAQKSQEVVYFRAENKLKQLKKEQCLLQERIHKISHGSRNRQEAEHM
QHLKKISALKNQLEKLETESRALNQEIKDRQQALHKGREEYDKLSMEEKNIKASLESKSK
RKKQLMASRSNRLRRFGDHMPELMESINKAFAQGRFKKKPVGPIGACISLKDPTLTLAVE
CCLGFFLKSFCCDNYKDEKVLQGLMSQYFYKGNRPQIMVCPFTDHVYNLQGRGVHHPEFP
SVLDCLNIENPVIANCLIDMRSIESILVIREKARARKVMQGSRPPKNCREAFTADGDQVF
TNRYYTPEHEVLVKYLGGDPEAEISLVNGELENIQAQLLRFQLHSCSVKEDIQLMEEKLR
SVIMACKKNQESINKVKASITELENIEEAQDEDISSLEEEAQENEQKIELEKRIVKEAED
ELRKHEKGLLAVNQKFKDVKCKMEKLSDEMEQLKEEQVKAETVCNKLDQTMKTLEKKLKD
HQNNIQSMKEDLSLQEEDLRDCEAKARELCPERQQVDQSPRSIDVEITRLRQKIKTQENS
HGDKEQIIREYAEAHSNYKSKSSQLRDLRKFIDRLDNIMIDRQDRYKTLRKSLSVRCKLY
FNNFMIQLHCCGSMMFDHNNETLSISVKPPGQEMNSVSDMRSLSGGERSFSTVCFILALW
EITESPFRCLDEFDVYMDMHNRSISMNMLVALSERQHLRQFIFITPQSISQLPKSTNITI
HQLQDPEKDTEEE
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggaatggatttggacatctctctgccatgaataagaggaaatctggtgttcac
aatgctgtaaaaccatcgaagacccctcggactgatggtaaaactcatgtgttggaggag
gaggatgttgatgaggaggatggagcccttcaagatcatctttctgcttcgaatgtcgga
gatatcggtgtgatagaaagtataactttgaggaacttcatgagccaccatttgcttgga
cctttaaaatttggagcaaatgtcaacttcattgttggaaacaatggaactgggaaaagt
gccattctgacagctcttatagtgggtctcggtggaaaagcaactacaactaatagagga
acgtctttgaaaggttttgtgaaatatggagagacttctacagacattaaagtgaaatta
aaaaaccgaggaaatgacccctataaaggggatgtttatggagacagcatctgcattgaa
catcggatcacaagtgatggatgcaggacttgtaagatcaagaataaagcagggcatgtg
gtttccactaagaaggaggagttgactgcaatactggaccattttggaatccaggttgac
aatcctgtgtctgtccttaaccaagaaatgagtaaacaattcctgcattcgaaaagtgaa
gcggacaaatacaggtttttcatgaaagctactcttctggagcaaatgaaaagagactac
attcacatcaagcagactaaagccgtgacacgagaccaggtggaaagacaagaggagtgt
ctcagagatctcaggcagttattcttgcagaggaaagaaagatatgagcgcatgtcgtct
ctggatgatatgagacagactctggaggacctgaaaaagaagatggcgtggtctttggtg
agagagaaagagagtcaagttgaacagctgaaggaacaaatcgaaaaagaagatgctgat
tgtaaacatgaagaaaagctgcagctctgtcagaacaaagttgctgttgctgagaagaaa
ctgcaggacagccagaaacatctgtgtacgcttcgagaggagcaggaacatctcacagag
gagagccggaaaatgaaggaggaaattaaagtcaaaacaaaagcacagaaaagccaggag
gtggtttacttccgcgctgagaataaattgaaacagttaaaaaaggagcaatgccttctt
caggagagaattcacaaaataagtcatggcagcagaaaccgccaagaggccgagcacatg
cagcatcttaaaaaaatatctgccttgaaaaaccagctggaaaagcttgagacagagtcc
agagctctgaatcaagagattaaggacagacaacaagctctacataaaggaagagaggaa
tacgataaactcagcatggaggaaaagaacataaaagcctctctggagtccaaatcgaag
agaaaaaagcagctgatggccagcagatctaacagactgaggcggtttggtgatcacatg
ccagaattgatggagtccatcaacaaagccttcgctcaggggcgattcaagaagaaacct
gtgggaccaataggtgcatgcatcagtctaaaagatcccactttaaccttggctgtagag
tgttgcttaggattttttttgaaaagcttttgctgtgacaattacaaggatgaaaaagtc
cttcagggattgatgtcgcagtatttctacaaaggcaacaggcctcagataatggtgtgt
ccattcacagaccatgtttataatcttcaaggccgtggagtccatcatcctgagtttcca
tcagtgctggactgccttaatatcgagaacccggtcatagcaaactgtcttattgacatg
aggagcattgagagcattctggtcatcagagaaaaagctcgtgccaggaaggtcatgcag
ggctcaagaccaccaaagaattgccgcgaggccttcactgcagatggtgatcaggttttc
accaatcgctattacacccctgaacatgaagttctggtcaaatatcttggtggagaccca
gaagcagaaataagtctagtgaacggagagctggagaacattcaggctcagcttttacgc
ttccagcttcactcctgctctgtgaaggaggacattcagctcatggaggagaaattgcgt
agtgttatcatggcctgcaaaaagaatcaggagagtataaataaggttaaagcttcgata
acagaacttgagaacattgaggaggcgcaggatgaggacatcagctctctggaggaagag
gctcaagagaacgagcagaagatcgaattggagaagagaatcgtgaaagaggctgaagat
gaactccgaaaacatgagaaagggctcttggctgtcaatcagaaattcaaagatgtgaaa
tgtaaaatggagaaactgtcagatgagatggagcagctgaaggaggagcaagtgaaggca
gaaactgtttgcaacaaacttgatcaaaccatgaagaccttggagaagaaactcaaggat
catcagaacaacattcagagcatgaaagaagatttgtccctccaagaggaagacttgcgg
gattgtgaagccaaagcccgagagctgtgtcctgagcgccagcaggttgatcagagtccc
agaagcattgatgtggagatcacacgcctgcgacagaaaatcaaaacgcaagagaacagt
cacggcgataaggagcaaattatccgggagtatgcggaggctcacagtaattacaaaagc
aaatccagccagctgagggacctcaggaagtttatcgaccgtctcgacaacatcatgatt
gaccgccaggaccgatacaaaacactgcgaaagtcgctttctgtaaggtgcaagctgtac
ttcaacaacttcatgatccagctgcactgctgtggctctatgatgtttgaccacaacaat
gaaacgctgtccatttctgtgaagccgcctggtcaggagatgaacagcgtcagtgacatg
cgctctctctcgggcggtgaacgctccttctccaccgtctgctttattctggcactctgg
gaaatcacagagtctcctttccgctgcctggacgagtttgatgtttacatggacatgcac
aatcgcagcatttcaatgaacatgcttgtggcactttccgagcgtcaacatctgcggcag
ttcatcttcatcacccctcagtctatcagccaacttcctaaaagcaccaacatcacaatc
caccagcttcaggatccagagaaagacactgaggaggagtga
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