Danio rerio (zebrafish): 797354
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Entry
797354 CDS
T01004
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04110
Cell cycle
dre04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
797354 (smc1b)
04114 Oocyte meiosis
797354 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
797354 (smc1b)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
797354 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
797354 (smc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
AAA_13
Motif
Other DBs
NCBI-GeneID:
797354
NCBI-ProteinID:
XP_068073614
ZFIN:
ZDB-GENE-091217-1
Ensembl:
ENSDARG00000014402
UniProt:
A0AB32THU2
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All DBs
Position
25:complement(17489576..17516632)
Genome browser
AA seq
1234 aa
AA seq
DB search
MGFLKQLDVENFKSWRGKQTIGPFKRFNCIIGTNGSGKSNVMDALGFVMGERAANLRVKH
TRDLIHGAHIGNPVSTFASVTMIYCGDNDEEMTFSRRISGESSEYLVNGKHVTLAKYTGE
LQKIGIVVKAKNCLVYQGAVESIAMMNAKERTKMFERISGSGDLNIEYDTKLAVLQKAKE
DTQFHFNRKKAATAEKKQVFKDKTEAQRYQSLVDDLRECKLQLTLFQLFHNEKSIDAQSA
SLGDMQAAAAQQKISLDAWEQTVKTQKKEHGRLNRELQQLEKEIRSQEQILNQQRPQYIK
AKVNTSHHEQKVQEAHRSLQKYQNLQAKKVQELEELKRELTELERAWKTSERQMEEEEAR
RGAGVQLQESQLERYKELKELARRNGAILNQSAEKLHWEVKADREKLQFDLRRKSEIQGN
IKHSQTHLEDISRRAEKLEEYVNTTTQTLEEQRQQEEQLSEELAKGLLRMEEVNVELAQV
LTKLQNARLDSQENRRQQKRDEVLESLRRLYPDTVYGRLVELCQPIHKKYQLAVTKVFGK
NMNAIVVTSAYVAHDCIRYLKEERAEPETFLPIDYIDVPILNERLREVQGAKMVVDVVQC
SQNAPQLKRVIQYVCGNSLVCETLKDARRIAFDGPERLQTVALDGTLFRKSGVISGGSSD
LSKKARRWEEKDMNKLKEEKDKLSSEMRALMKLKRKEVDLKQIRAQSQGNQTRLKYANTE
LDSIRKKSIPAAQIEISKLRSELSNLEAQIEIQTGSMELKDSEMKAVKDKIHQMEDLVFA
DFCAEIGVANIREYEQDYLRLQQELEKKRLQFESQQTRLSTQLEYEQAQLGKLVKLMKKI
EETIEKEKNIIISLKEGEDNILIAVEQTQSNLLKLNNQHSEKTHLVNNAKTELDKALTGL
QERNKVLMKLQKQTISTDAALEHLRLTKHNLLLTCKIDGLPLTLISGALDDISEIQLDSE
SQSVSTLDIFEREAQMVFDFSALDNSLKMLTEESEVEAMLEKLKEGVSSLESMIMMSRAP
NLKALDKIREVKDSYREVLDAFDISTITTKKRNQEFEQVKAKRFHLFSQCFEHVSVVIDQ
IYKKLCRNASAQAILSAENPNEPYLDGINYNCVAPGKRFMAMDNLSGGEKAIAALALVFA
IHSFRPAPFFVLDEVDAALDNTNIGKVTGFFRMMSRESCQIIVISLKEEFYSRADALLGV
YSMFDECMFSRLLTLDLTPYPLNDENATDREKDK
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcttaaaacaattagacgtcgaaaatttcaagtcctggagaggaaaacaaact
atcggcccatttaaaaggttcaattgcataattggcaccaacggatcaggcaaatctaat
gtcatggatgctcttggatttgtgatgggagaaagagcagctaatctccgcgttaaacac
accagagatctcatccacggtgcccacattggcaacccggtgtccacttttgccagcgtg
accatgatctactgtggagacaatgatgaggaaatgaccttcagtagacgcatttcaggg
gagtcttccgagtatcttgtgaatggtaaacatgtcactttggcgaagtacactggagag
ctgcagaagatcggcatcgtggtgaaagccaagaattgtcttgtgtatcagggtgctgtg
gagtcaatcgccatgatgaatgcaaaagaacgaacaaagatgtttgaacgaatcagtggc
tctggagatctgaatattgaatacgataccaagctggcggtcctgcagaaagccaaagag
gacacccagttccactttaacaggaagaaagcggctacagctgagaagaaacaagtcttt
aaagataagaccgaggcgcaaagatatcagtcgctggtggatgatctcagagaatgcaaa
cttcaactgaccctctttcagctctttcacaacgagaaaagcattgatgcacagtcagct
tcattgggggacatgcaggcagccgcagcgcagcagaagatcagcctggacgcctgggaa
caaactgtgaagacccagaagaaagaacatgggcgtctgaacagagaacttcagcagctg
gagaaggagatcagatctcaggagcagattctgaatcaacagaggcctcagtacatcaaa
gctaaagtgaacacctcccaccatgagcagaaagtgcaggaggctcacagatctcttcaa
aagtaccagaatctacaggccaagaaggtgcaggagctggaggagctaaagagagaactg
actgagctagagagagcctggaagacctcagagaggcagatggaggaggaggaggctcga
agaggagcaggagtacagctgcaggagagccagttggagcgttataaggaactcaaagag
ttagctagaaggaacggagccattttaaaccaaagcgcagaaaagttgcactgggaggta
aaagcggaccgtgagaagctccagtttgacctgagaaggaaaagtgagattcagggaaat
atcaaacatagtcaaactcatctggaggatatcagcagaagggcagagaaactggaggaa
tatgtcaacactacaacccaaactctggaggagcagcgtcagcaggaggagcagctgtca
gaggagctggcaaaaggccttttgcgaatggaggaggtgaatgtggagctcgcacaagtg
ctgaccaagctgcagaacgcccgtctggacagccaagagaaccgacgacagcagaaacga
gacgaagtgctggaaagcctcaggagactctaccctgatactgtgtatggtcgtctggtg
gagctgtgccagcccatccacaagaaataccaacttgcagtcacaaaggtgtttggcaag
aacatgaacgctatcgttgtgacgtctgcttatgtggcccatgattgcattcgatatctg
aaagaggaaagagccgaaccagagacttttcttcctattgactatatagatgtgcccatt
ctgaatgagcgtctgagggaggtgcagggagccaagatggtggtggatgtggttcagtgt
tcacaaaacgcccctcagctgaagagggtgatccagtatgtgtgtggaaactcactggtc
tgtgagactctgaaagatgcccgtcgtatcgcctttgatggtcctgagcgtcttcagacg
gtggctcttgatggcaccttgtttcggaagtctggggtgatttctggaggttcttcggac
ctgagcaagaaagctcgacgctgggaagagaaagatatgaacaaacttaaggaggagaag
gataagctgtcatctgagatgcgtgccttaatgaagctgaagcgtaaggaagtggacttg
aagcagatcagggctcagtctcagggaaaccagactcgccttaaatacgctaacacggaa
ctagactccatacgcaagaagagcatccctgctgctcagatcgagatttccaaactcagg
agtgagctctccaaccttgaggcccagattgagatacagactgggagcatggaactgaag
gatagtgagatgaaggctgtcaaagacaaaattcatcagatggaggatttggtgtttgcg
gacttctgtgcagagatcggtgtggcaaacattcgtgagtatgagcaggattatctccga
ctgcagcaggagcttgagaagaagcgcctgcagttcgagtcccagcaaacccgtctaagt
acacagctcgagtacgaacaggcccagctggggaaacttgtcaaactgatgaagaagata
gaagagaccatagagaaagagaagaacatcattatcagcctaaaagagggggaagacaac
attttaatagctgtggagcagacccaatccaatctgctcaaactgaacaaccagcattca
gaaaagactcatttagtcaacaatgccaagacagagcttgacaaagctcttacaggcctc
caggagagaaacaaggtgctgatgaagcttcagaagcaaacaatctccactgatgcggct
ctagagcacctgagactgactaaacacaacttgcttttaacctgtaaaatagacggcctc
ccgctgacgctgatctcaggagcactggatgacatcagtgaaatacagctggactcagag
tctcagagcgtcagcacactggacatttttgaacgagaggcgcagatggtgtttgatttt
tctgcattggacaacagccttaagatgctcactgaagagagtgaggtggaggctatgctg
gagaagcttaaagagggtgtctcttctctggaatccatgatcatgatgtccagagctcca
aacctcaaagctctagacaagatcagagaggtgaaggacagctaccgggaggttctggat
gcgttcgatataagcacaatcaccaccaagaagcgcaatcaagagtttgagcaggtgaag
gccaaacgcttccatctcttcagccagtgctttgaacacgtgtctgttgttatcgaccag
atctacaagaaactctgcagaaacgccagcgctcaggccattctcagtgctgaaaatcca
aacgagccctacctggacggcatcaactataactgcgtggctcctgggaaacgattcatg
gctatggacaacttgtcaggaggagagaaggccatcgctgctcttgctttggtctttgcc
attcacagctttcgtcctgctcccttctttgtgctggatgaggtggatgccgctctggac
aacacaaacattggcaaggttacgggatttttccggatgatgtcgagagagagctgtcag
atcattgtgatctccctaaaggaggagttctactcacgggcggatgctcttcttggagtc
tattcaatgtttgatgaatgcatgttcagccgtcttctgactctggacctcaccccgtac
ccactgaatgacgaaaacgccacagacagagagaaggacaaatga
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