Danio rerio (zebrafish): 797445
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Entry
797445 CDS
T01004
Symbol
cux1a
Name
(RefSeq) homeobox protein cut-like 1 isoform X8
KO
K09313
homeobox protein cut-like
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
797445 (cux1a)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
797445 (cux1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
Hydro_N_hd
Phage_GP20
Med9
HTH_40
Motif
Other DBs
NCBI-GeneID:
797445
NCBI-ProteinID:
XP_003199414
ZFIN:
ZDB-GENE-030131-5868
Ensembl:
ENSDARG00000078459
UniProt:
A0A8M1RNM7
LinkDB
All DBs
Position
10:complement(37901841..38156232)
Genome browser
AA seq
1450 aa
AA seq
DB search
MAANAGSMFQYWKRFDLQQLQKELDATATALANRQDESEQSRKKLIDQSREFKKNTPEDL
RKQIAPLLKGFQAEIDALSKRSKESEAAFLSVYKRLIDVPDPVSALEAAQQLQVTVRKMH
DLETENQRLKDTLQEYEREISEVKNQEVTIKALKEKLEQYERSLQAKNTEEAVEPNLDSS
EREERQSKGENLPNNYADKESQPEQSQESRTEDSDVKTQSLQTALEATQAELHELKTKYD
EESTAKANEIEAVMTDLERANQRAETAEREAGTLREQLTSAGKTLQSSNQIQNAPEMDKS
LEAELGAKEREVERLAEDVQRLQASLAQLSETSTNQISQLEQQLSSKEALLKQLEEKLQD
QSDYEEIKRELCTLKSVEHNSSDHHSSAQDSSKPLEMLLTGKDHSQLSESALKRLANSDF
TGAVGRKLKETTVENPQRLPATPVPTTLQGSPPPPSPQLLMRTGTATSESAASANGTHPF
SPTGIGPDFFTPGMASVGATFPPLAGKMALNSLLQRQLMQTIYTKALQDPSPSSVLFGPP
HYATTNSLSSPLPPQSAGSPEVNGMAPSPSQSEGAGSTSEGEEMDTAEIARQVKEQLIKH
NIGQRVFGHYVLGLSQGSVSEILARPKPWSKLTIRGKEPFHKMKHFLSDEQNILALRSIQ
GRQRENPGQNLNRVFQDVPKRRGGSEGSTRPGNITTRIRTPETGSDEAIKSILEQAKREL
QVQKAVESSQPPSSSSNSDENIRSILEQARREMEAQQVALEPVLKASSMGPTDLSLLGSK
LLGSPLSTLPYTPITQSLKKPSSSPLLDFHHGGVKKEMGEVAVSDVGLDGVVPKLGRLSE
SGLGGGSWREHWWSTGLSERRGSSQPSVSEDAHSQEDSKEKLPRLGSTAPVAPASSLDYW
KDWPSSESPYSQSSELSLQMPSGSETPQSSPLPSSSPLLSLPKVAKPVVPPLTPEQYEYY
MYQEVDTVDLTQQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKHWSKLTQKGREP
FIRMQLWLNGELGQALMPMPGQTQEITPKTSASCSPAPESPLSSAEESVKSQQEEQMCRS
SVQEPSEASESQPGTPLPLPLPGQAGLSIQEMVAMSAELDTYVITKKVKEVLTDNNLGQR
LFGESILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLSDPRNVEKLMDMKRMEKK
AYMKRRHSSIGESHSLESGLSAADLTQGASPQHLSQQPPQQMQPQQQQPQLKKPRVVLAP
EEKEALKRAYQQKPYPSPKTIEELASQLNLKTSTVINWFHNYRSRIRRELFIEEIQAAAG
EGGSPSARPGKSGGEGENSCDGTESDSTAEGRPSGSEERKGFLESPGLGHREEDGEGEFP
SASGTSRPRGGIIDSLFGIPESISVTNAATTPCRNPKDSSLRKKKAANLNNIIHRLEKAA
NRDEPHEWEF
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaatgcgggatcgatgtttcaatattggaaacgctttgatttgcagcagctc
cagaaagaactggatgccaccgccacagccctggccaaccgacaggatgagagcgagcag
tccaggaaaaaactcatcgaccaaagccgcgagttcaagaagaatactccagaggatttg
cgtaaacagatagctcctttgctgaagggcttccaagcagagatcgacgccttgagtaaa
agaagtaaagaatcagaggctgctttcctcagcgtgtacaagagattaatcgatgtccca
gatcccgtctcggcactggaagcagctcagcaactccaggtgacggttcggaagatgcac
gacttggagaccgaaaaccagaggctcaaagatacactacaagagtacgaacgtgaaatt
tcagaggttaaaaaccaagaagtcactattaaagcacttaaagagaagctggagcagtat
gagcgttctctgcaggccaagaacacagaggaggctgtcgagccgaacttggactcatca
gaaagagaagagaggcaaagcaaaggagaaaaccttccaaacaactatgcagacaaggag
agtcagccagagcagagccaggagagcaggacagaagactcggatgtgaaaacacagtcc
ttacaaacagcacttgaagcaactcaggcagaactccacgaactgaagacgaaatatgat
gaagaatccacagcaaaggccaatgagattgaagcggtgatgacagacttggaaagagcc
aatcagagggccgagacggcagagagggaggccgggaccctgagggagcagctcacttct
gctggaaagaccctgcaatcatccaatcagatccagaacgctccggaaatggacaagtct
ctggaggcagagctgggtgcgaaagagagggaggtggagcgtttggctgaggacgttcag
agacttcaggccagtctggctcagctcagcgagacatcaaccaaccagatcagccagctc
gagcagcagctcagctccaaagaggcactactaaagcaacttgaagaaaagcttcaagat
cagtcagactacgaggagatcaaacgagaactctgcaccctgaaatcagtggagcacaac
tcatcagatcatcactcttcagcgcaggactcatccaagccactggagatgttgctgaca
gggaaagaccatagccagctgtcagagagcgctttgaaacgactggccaacagtgacttc
actggagcagtgggccgtaaactgaaagaaactacagtggaaaaccctcagcgtcttcct
gccactccagtcccgaccaccctccaggggtctccacctccaccctcccctcagctgctg
atgaggacgggcaccgctacctccgaatccgctgccagtgccaacggtacccaccctttc
tcccccacaggcatcgggccggacttcttcacccccggcatggccagcgtgggcgccacg
ttccccccgctggctggcaaaatggcactcaactctcttcttcagaggcagctcatgcaa
accatctacaccaaagccctccaggacccctctcccagttcggtgctgttcgggccaccc
cattacgctaccaccaactccctctccagccccctgccgccccagtcggcaggcagcccg
gaggttaacggcatggcgccttcgcccagccaatcagagggcgcgggcagcacgtcggaa
ggtgaggaaatggatacagcggagattgcccgacaggtcaaggagcagctgatcaaacac
aacatcggccagcgcgtgttcggccattacgtgctgggtctctcccaaggctccgttagc
gaaattctggctcggcccaaaccttggagcaagctaaccatccgtggcaaagagccgttt
cacaagatgaagcacttcctgtccgatgagcagaacatcctggcgctgaggagcatccag
ggcaggcagagagagaacccaggccagaacctgaacagagtgtttcaggatgttccgaag
cgaagaggcggctctgaaggctccacgcggccaggtaacatcaccacacggatccgcaca
cctgaaaccggctccgatgaagccatcaagtccatcttagagcaggccaagagagagtta
caagtgcagaaagcagtcgagagctctcagcctccgtcctcctccagcaactcggacgag
aacattcgctccatcctcgagcaggctcgcagggagatggaggcgcagcaggtggcactg
gagcccgtcttgaaggccagctccatgggcccgacggacctctcgctcctgggctccaaa
ctcctgggctccccgctctccaccctgccctacacccccatcacccagtccctgaagaag
ccctctagttcaccgctgctggacttccaccatggtggagtgaagaaggagatgggcgag
gtggccgtttcggatgtgggtctggacggagtggtgcccaagctgggccgtttgtctgag
agcggtttgggtggaggctcgtggagggagcactggtggagcacaggcctgtcagagcgc
cgcgggtccagccagccctccgttagtgaagacgcacacagtcaagaggacagcaaagag
aagctccctcggctgggcagcactgcgccggtggctcctgcgtcgtctctggattactgg
aaggactggccgagctcagaatcgccgtactctcagagctcagagctcagcctgcagatg
cccagtggcagtgagacccctcagagcagcccactgccttcctcctcgcccttactgtcc
ctgcccaaagtggccaaacctgtggtgccgccgcttacgccagagcaatacgagtactac
atgtaccaggaggtggacactgtcgacctcacacagcaggtcaaagaaaaactcgccaag
aacggcatctgccagcgcatcttcggggagaaggtgctgggtctctctcaggggagtgtg
agcgacatgctctctcgaccaaagcactggagcaaactcacacagaagggaagggagccg
tttatacgcatgcagttatggctgaacggagagctgggacaggcactgatgccaatgcct
ggacagacacaagaaatcacccccaaaacctcggccagctgcagtcctgccccagaatcc
cccctgagctcggctgaggagtctgtgaagagccagcaggaggagcagatgtgccgatcc
tccgtccaggagcccagcgaagcctccgagtctcagcccgggacgccgctgccgctgcct
ctgccgggacaggccggtctcagcattcaggagatggtggccatgtcagccgagctggac
acgtacgtcatcacgaaaaaagtcaaagaagtcctcactgataacaacctgggccagcgt
ctgttcggggagagcattctgggtttgacgcagggctcagtgtctgatctgctggctcga
cccaaaccctggcacaagctcagcctgaagggtcgcgagccgttcgtgcgcatgcagctg
tggttgagtgatccgcgcaacgtggagaagctgatggacatgaagcgcatggagaagaaa
gcctacatgaaaaggcgccacagctccatcggtgagagtcattcgctggagagcggcttg
tctgcagcggacctgacacagggtgccagtccccaacacctatcccagcagccgccgcag
cagatgcagcctcaacagcagcagccccagctgaagaaaccccgggtggttctggctccg
gaagagaaggaagctctgaagcgggcctaccagcagaagccttacccctcccctaaaacc
attgaggagttagcgagtcagctcaacctcaaaaccagcaccgtcatcaactggttccac
aactacaggtctcgtatccggcgagagctttttatcgaagagatccaggcagcagcaggt
gaaggtggatctccatctgcacggcctggaaaatctggaggcgagggagaaaacagctgc
gacggcactgagtccgacagcacggcagaaggccgaccgagtggctcagaggagcgcaag
ggcttcctggagagcccgggcctcggccacagagaagaagatggcgagggcgagtttcct
agtgcctcgggcaccagccggccacgaggaggcatcatagacagcctgttcggcatcccc
gagtccatatccgtcaccaatgctgccacgaccccctgccgaaatccaaaggatagcagt
ctacgcaagaagaaagcagccaacctcaacaacatcatccaccggctggagaaagcggcg
aaccgagacgagcctcacgaatgggagttctga
DBGET
integrated database retrieval system
