Danio rerio (zebrafish): 797520
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Entry
797520 CDS
T01004
Symbol
thsd1
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1 isoform X1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dre04990
]
797520 (thsd1)
Domain-containing proteins not elsewhere classified [BR:
dre04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
797520 (thsd1)
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Gene cluster
GFIT
Motif
Pfam:
THSD1_D3
THSD1_N
THSD1_D2
TSP_1
TSP1_spondin
TSP1_ADAMTS
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
797520
NCBI-ProteinID:
XP_001337990
ZFIN:
ZDB-GENE-100105-3
UniProt:
A0A8M1PZ64
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All DBs
Position
10:29660630..29669527
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AA seq
869 aa
AA seq
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MTQGFPTATSFVLLFLMGFAMAGIQLWPSMHIALSNASVFVDYSTENNLTDHRLTVELID
VDRNVTVLTRMLPFNQSEGSMEFNCSCFLYAGSFRFRLEQKHVLGVSNRSAIWWWSPVLH
VHWPTFHLVVDRGSNNQSSTDFRIGVYTNDHFHPCSSSKASTLYLDVSYLEQVQVKRTTF
EKVQNRIRHNIKVARSQHLEMPCASPLTERGFIQISIKSPHTQQDIKSSGPLYLSSIFSY
KLVVDNSYKRGCEGAVSVRRIAPPCTVANGKILLYKEQSKDSSSPSHLAFNFLTQGENET
EFNCSIFDAGKNKYCFNFTLVYSQAASLAHTCVIVQRHTKMWGPWQAWSGCSVTCGEGVR
ERVRECLLPSSGGIQCTGMVREQSHCSLEDCTEEIPPPPVSPPPAVSTPLTSNLVVVSGI
ALCLAVILATIFVTVWRKLCRAPKCSSMRRGSLHSPSGRKNSDQASICGHSMQRPSFSES
LQAAPLQKGFTLPAKQGPSNRGVLAHQQSMSLPLPHPQDPERMSPSGQKIIPPLFGYRLA
QQQLKEMKKKGLKETTQVYHVSQSPVDDTMLEATASAGLTPVPQEFDSPEESSSSHFRIR
SPFPEPTWHSKNSTLSDRQKIDMLHNPSKSAFSASSCRLERTADWVEMVERSRVPYCKNT
NFRRTSSFNETNQQPFLPSRPYRERSMTQVTPRQLPEGSCRSRPWEHTLPELEVWSCSSP
RMTESSVDNRRRPWVDTPPSQSNSKDSAPATPTKEPLVDRHHGARSPSSALDRAERAEQN
WSRRGPSPIQRNILARKLREANSSTGQRQRSSTFSTSEQRRGRCRSLPLSADYSNSPYSL
TESEQRMMDISGYLGEDDGVEVLTIHKLT
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgacacagggtttccctacagcgacctcatttgtgctgctcttcctgatgggatttgca
atggctggtatccagctatggccatcgatgcacattgccttgagcaatgccagtgtgttt
gtggattacagcactgaaaacaacctcactgaccacagactgacagtggaattgattgac
gtggacaggaatgttacagtacttaccaggatgcttcctttcaaccaatcagaagggtca
atggagtttaactgctcctgttttctgtatgctggtagtttcagattcagactggagcag
aagcacgtccttggcgtctctaacaggagtgccatctggtggtggagtccggttctacat
gtgcactggcccacctttcacttagttgtggataggggcagcaacaaccagagctccact
gactttaggattggtgtgtacactaatgaccatttccatccatgttcaagcagcaaagcg
tcaactctgtaccttgatgtgagctaccttgaacaagtccaggtaaaaagaaccaccttt
gagaaggtgcagaatcggataagacataatattaaagtagccaggtctcaacatctagaa
atgccatgtgcatcccctctgacagagcgtggcttcatccagatttccataaagtcccct
catacccaacaagacattaaatcatctggtcccctttacctgtccagcatcttctcctac
aagcttgtcgtggataacagttacaaaagaggttgtgaaggagcagtttctgtccgtcga
attgctcctccctgtacagttgcaaatggaaagattctgctttacaaggaacaaagtaaa
gactcatcttctccctctcacctggccttcaacttcctcacacagggggaaaatgagact
gaatttaactgctccatctttgacgctggcaagaataagtactgcttcaatttcactctg
gtctacagtcaggctgccagtttagcgcacacctgtgtgattgtgcaaagacatacaaaa
atgtggggaccgtggcaggcatggagtggttgtagtgtgacttgtggggaaggtgtgcga
gagcgtgtccgcgaatgtctgctgccctctagtggtgggatacaatgcactggcatggtt
agggagcagtcacactgttcactagaagactgcactgaggagattccccctccaccagtc
agccctccaccagctgtgagcacacctctaactagtaatctagtggtagtgtctgggatc
gctctttgcctggctgtgatcctggccaccatttttgttacagtgtggcgaaaactgtgt
cgtgccccaaaatgcagctctatgcgccgtggatctctacactctcctagcggtcgaaag
aactctgatcaagcatctatctgtggtcacagcatgcagaggcccagtttctcagaaagt
ctccaggcagctcccctacagaagggatttaccttacctgctaagcagggaccatcaaac
cgaggtgtattggctcatcaacagagcatgtcccttcctcttccccatccacaagaccca
gagaggatgtctccttctggccaaaagatcattccacccctttttggctaccgcttagct
caacagcagctcaaggaaatgaagaagaaaggcttaaaagagactactcaagtctaccat
gtctcccaaagtccagtggatgacaccatgctagaagcaacggcttcagcaggtctaact
cctgtgccccaagaatttgacagtccagaggagtcaagcagtagccacttccgcattagg
tctccctttccagaacccacatggcattccaaaaacagtaccttgtcagatagacaaaag
atagacatgttacataatccttcgaagtctgcatttagtgccagctcatgtcgtcttgag
cgcactgcagactgggttgagatggtagagcgcagcagagtaccatattgcaagaatacc
aatttcaggaggacttcaagcttcaatgagaccaaccagcagccatttctcccatctcgg
ccatacagagaaagaagcatgacccaggtgacccctcggcaactgcctgagggcagctgt
agaagcagaccctgggaacatacgcttcctgaacttgaggtctggtcttgttccagtcct
aggatgactgaaagctcagtggacaacaggagaagaccatgggttgacactcccccatca
cagtcaaattcaaaagattcagctccagcgacaccaacaaaagaacccttggtggatcgt
catcacggggcccggagcccatcttctgcactggaccgtgctgaaagagcagagcagaac
tggagcagaagaggcccctcacccatccagaggaacatactagcaaggaagctacgagag
gcgaattcctctaccggccaaaggcaacgcagttccacattttctacctcagagcagcgt
aggggacgctgtcgcagccttcctctctctgcagactacagcaactctccatatagtctc
acagagtcagaacaacgcatgatggacatttctggatacttgggtgaagatgatggcgta
gaggttctgactattcataagcttacctga
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