Danio rerio (zebrafish): 798674
Help
Entry
798674 CDS
T01004
Symbol
si:ch211-194e1.9
Name
(RefSeq) NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
dre04054
]
798674 (si:ch211-194e1.9)
Pattern recognition receptors [BR:
dre04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
798674 (si:ch211-194e1.9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FISNA
NLRC4_HD2
PRY
NOD2_WH
SPRY
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
798674
NCBI-ProteinID:
XP_017213032
ZFIN:
ZDB-GENE-081105-109
Ensembl:
ENSDARG00000068127
UniProt:
F1QNR9
LinkDB
All DBs
Position
8:complement(49356829..49375590)
Genome browser
AA seq
1037 aa
AA seq
DB search
MSFNEKKDDGGSVHLQPQKAAFTEPSCVSMKSSSSMFEPLKFRDKTVTSHVQLQHQEAAC
PEPSCMSMKSDSSMFEPLKFTNESVTPDVRVFPHKAACPEPSCVSLKSNSSMFEPLKFED
EKLSFDFMLEKTEASEKPMHDELQRVKGQHKSSMKKKYETLFDGMSLQDNETLLNSIYTQ
LYIIEGESEGVNEEHEVLNMEKSAKMKHSQDTPIFCNDIFTALAEAGCEEKDNIKVVLTK
GIAGIGKTISVQKFILDWAEGNSNQQVDFMFVFPFRELNLIQDQQYSLHRLLLDFYPEIQ
DLNTKIFKECTVMFIFDGLDESRIPLMFSDGQKVCDVAEKSSVGALMSNLMKGELLPSAL
IWITTRPAAANQIPSKYINRLTEIQGFDEPQKEEYFRKRVSDEHQANRIISHIRRARSLN
IMCHIPVFCWISATVLQNLLKQDDNAEIPQTLTEMYIHFLLIQINTRNQKYEERDPEKLL
QSGREVIVKLAEVAFKQLMKGNVMFYEEDLRESSIDITDASVYSGICTEIFKEESVIHQR
KIYSFIHLSTQEFLAAFYWFHCYINRLMEPLKFFDSLYYLLRGIVDKAIESKNGHLDLFL
RFLLGVSMETNQRLLQGLLTHNENSSESIERTTQYIKEKIKGGGGLSTERSINLFLCLLE
VKDQTLSREIQDFVKSEKHSEKKLSPAHCSAVAYMLQMSLEVLDELDVQTYNTSDEGRRR
LIPAVINCRKAFFAGCNLTVQSCEIVASALQSSNCVLRELDLSNNDLEDSGAKLLSDGLK
SPNCHLEMLRLSGCMVTEKGCGFLSSALSSNPSHLRELDLSYNHPGPSGVRLLTDKLHDP
KCSLKILNVSHDGHFRITQGLQKYACSLTLDPNTAYCHLILTEENKKVTYVEEQQSYPDL
PERFEHQEQVLCQEALTGRCYWEVEGTGRVDTSVTYKGIGRKGGSDCRFGYNDKSWSLYC
SKYRYTIWHNNNITDIPVPSPPSNRVGVYVDCPAGTLSFYSVSDRHTLTHLHTFNTTFSE
SLYAGIRVYPDSSVSLC
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcaatgagaagaaagacgatgggggttctgtgcatcttcagccacagaaagca
gcatttacagagcccagctgtgtgtctatgaagagtagcagctctatgtttgagcctctc
aaattcagagataaaacagtcacatctcatgtccaattgcagcaccaggaagcagcatgc
ccagagcccagctgtatgtctatgaagagcgacagctctatgtttgaacctcttaaattt
acaaatgaatcagtgacccctgatgtaagggtgtttcctcacaaagcagcttgtccagaa
cccagctgtgtttctttgaagagcaacagctccatgtttgaacctcttaagttcgaagat
gaaaaactaagctttgacttcatgcttgagaagactgaagcctcggagaaaccaatgcat
gatgaattgcagagagtcaagggccaacacaaaagcagcatgaagaaaaaatatgaaaca
ttatttgatggaatgagtctacaagacaacgaaacccttcttaacagtatctatacacag
ctctacataatagagggagaaagtgagggggtgaatgaagaacacgaagttctaaatatg
gagaaatcagccaaaatgaaacactcacaagacactccaatcttctgcaatgatattttt
acagcattagctgaagctggatgtgaggagaaagacaatatcaaggttgttcttactaaa
ggcattgctggtatcggtaaaaccatatctgtacagaagttcattttggactgggctgag
ggaaactccaatcagcaagtagatttcatgtttgtgtttccatttcgagagctgaacttg
attcaagatcaacaatacagtcttcacagacttctgctggacttttatcctgagatccaa
gatctgaacacaaagatttttaaggaatgtacggttatgttcatttttgatggtttagat
gaaagcagaataccactgatgttttcagatggtcagaaagtttgtgatgtggctgaaaaa
tcttctgtcggtgcgttgatgtcaaacctgatgaaaggagagctgcttccttctgctctc
atctggatcaccactagaccagcagcagccaatcagatcccctcaaaatacatcaaccga
ctaacagaaattcagggattcgatgagcctcagaaggaggaatatttcaggaagagagtt
agtgatgagcatcaagccaacagaatcatctcccacatcagaagagcaagaagcctcaac
atcatgtgccacatacccgtcttctgctggatctcagccactgtgcttcaaaacctcctg
aaacaagatgacaatgcagaaatccctcaaactctgactgagatgtacattcacttcctg
ctgattcagataaacacgaggaatcagaaatatgaggaacgagatccagagaaactcctg
cagtccggcagagaagtgattgtgaaacttgctgaagtggctttcaaacagcttatgaag
ggaaacgtgatgttctacgaagaggacctgagagagagcagcatagatatcactgacgcc
tcagtatactctgggatctgcactgagatctttaaggaggaatctgtaattcatcagagg
aagatctatagcttcattcatctgagcactcaggagtttcttgctgctttctattggttt
cattgctacataaacagactcatggaaccacttaagttctttgattctctatactacttg
ctcagagggatagtagacaaagcgatagagagtaaaaatggacaccttgatctgttcctg
cggttcctgctaggtgtctcaatggagaccaatcagagactcttgcagggtctattgaca
cacaatgagaacagctcagagagcatcgagagaaccacacagtacattaaagagaagatc
aaaggtggaggtggactctccactgaaagatccatcaatctgttcctctgtctgctggaa
gtgaaggatcagacgttgtccagagagattcaggattttgtcaaatcagagaagcattca
gagaagaaactctctcctgctcactgctcagcggttgcctacatgcttcagatgtcactg
gaggtgctggatgagctggatgttcagacatacaacacatcagatgagggtagaagacga
ctgatacctgctgtgatcaactgcagaaaagcgttttttgctgggtgtaatctcactgtc
cagtcctgtgaaattgttgcatcagctctacaatcctcaaactgtgtcttgagagagctg
gacctcagtaacaatgaccttgaggattctggggcgaaactgctttctgatggtctgaag
agtccaaactgtcacctggagatgttgaggttgtctggctgtatggtgacagagaaaggc
tgtggttttctgtcttcagctctgagttcaaacccttcacacttgagagagctggatttg
agctacaatcacccaggaccatcaggagttcggctgctcacagacaaactgcatgatcca
aaatgctcactcaagatactcaatgtgagtcatgatggtcatttcagaattacacaagga
cttcaaaaatatgcatgttctctcacactagacccaaacacagcatactgtcatctcatt
ttgactgaggagaacaaaaaggttacctatgtggaagagcagcagtcatatcccgatctt
ccagagcgatttgagcaccaggagcaggttctgtgtcaagaggctcttactggacgctgt
tactgggaagttgaagggactgggagagttgatacatctgtgacgtataaaggaatcggc
agaaaaggaggaagtgattgtaggtttggatacaatgacaaatcctggagtctgtactgc
tctaaatatagatacactatttggcacaataataacatcactgacatccctgtaccttca
cccccctctaatagagtaggggtgtatgttgactgtccagccggtacgctttcattttac
agcgtttccgacagacacacactcacacacttacacacatttaacaccacattcagtgag
tcgctctatgctgggattagggtatatcctgattcttcagtgtctctgtgttaa
DBGET
integrated database retrieval system
