KEGG   Danio rerio (zebrafish): 799153
Entry
799153            CDS       T01004                                 
Symbol
sort1b
Name
(RefSeq) sortilin 1b precursor
  KO
K12388  sortilin
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04142  Lysosome
Brite
KEGG Orthology (KO) [BR:dre00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    799153 (sort1b)
SSDB
Motif
Pfam: Sortilin-Vps10 Sortilin_C BNR_6 BNR_2
Other DBs
NCBI-GeneID: 799153
NCBI-ProteinID: NP_001119937
ZFIN: ZDB-GENE-030131-7447
Ensembl: ENSDARG00000056252
UniProt: A5PMG8
LinkDB
Position
8:complement(25041713..25074319)
AA seq 828 aa
MRGLGHFIALLFFPMAFGVDFHVDPGSSNAHPLYAKSPVSVRSLLGTGSDADFSRVHHRI
HKRSTDRGSDSCNGLTLEGYESKLTSNTHNWTFQDISGSVSLAWVGDGTGVVLALTTFQM
PLVFLRFGQSKLYRSENYGKSFEDVSELINNTFINTDFGIAIGPENSGKVILTGDASGGS
GARIFRSRDFGKSFVHTELPFHPLMQIMYNPQTTDVLAAISTKHDLWISKDFGTTWTKIH
EMVCVVKWGIDALFFSTNLNGSCFDKGMLVLRKSVDLGANIKTVAERIYSFGIGGRFLFA
SVMAASGNIIPSASEEIMRAIHVSVDLGETWNMAQLPPVSHEQFYSILAANDDMVFMHVD
EPGDTGIGTIYVSDDRGTVYSKSLERHLYTGGETDFTNVTSLRGVYTTSVLAEDNSVQTV
ITFDQGGEWVPLKKPENTKCDSTAKDAEMCSLHIHASYSTSMKVNVPMPPLSEPNAVGLI
LAHGSVGDAISMQTPDVYVSDDGGYTWLQALKGPHHYAILDSGGLLVAVEHNQAKPISEI
KFSTDEGQCWHVHTFTQTPMYFTGLASEPGARSVNVSLWGYEDAMISHWVTYTIDFKDLL
KRNCESDDYVQWLAHSDDISDPEDGCMLGYKERFLRVRKDSVCWIGREYVVNKQPTPCVC
TLDDFLCDFGYYRKEKSSECIEQAELKGHDLEICIHGKKEQLQTSGYRKIPGDKCEGGKQ
PERKVIDLSKRCVSDLLDPQPLNNPQSEQSTSHTAPIIAMVIAILLTGLVFGALFVKKYV
CGGRFLVHRYSVLQHNVEANGVDEPLETDVVGAPKNDFHDDSDEDLLE
NT seq 2487 nt   +upstreamnt  +downstreamnt
atgagaggcctaggacactttattgcacttttattttttccaatggcatttggtgtggat
ttccatgtggatcccggatcctctaacgcgcacccgctgtatgcgaagtctccggtatcc
gtcagaagtctgctcgggacgggatcggatgcagatttttctcgggttcaccatcgcatc
cataaaagaagcaccgaccgtggctcagactcatgtaatgggttaacgttagaaggatat
gagagcaagttaactagcaatacgcacaactggacatttcaagatattagtggatctgtg
tctttggcctgggttggggatggaactggggtagtcctggctttgacaacatttcagatg
ccattagtctttctgcgatttggacagtccaaactgtacaggagtgaaaactatggcaag
tcatttgaggatgtctcagaactcatcaataacaccttcatcaatactgactttgggatt
gctattggtccggaaaactctggcaaggtgattctcacgggagatgcttcgggaggcagt
ggtgccagaattttccgttcaagagactttggcaagagtttcgtccacacagagctgccc
tttcacccactaatgcagataatgtacaaccctcaaactactgatgtgcttgcggctatc
agcaccaagcatgacctctggatctcgaaagactttggcacaacatggacaaaaattcat
gagatggtgtgcgtggtgaaatggggaatagatgctctgttcttctcaaccaaccttaac
ggatcttgttttgataaagggatgctggtgctgagaaagtcagttgaccttggcgctaat
ataaagacggttgcagagaggatctactccttcgggattggtggacgttttctgtttgct
tcagttatggcagcatcaggaaacataataccgtcggcatcagaggaaatcatgcgtgcg
atacatgtgtcagtagaccttggtgagacatggaacatggcacaacttcctcctgtcagt
cacgagcagttttactcaatactggcagccaatgatgacatggtctttatgcatgtggat
gaaccaggagacacaggcattggcaccatctatgtgtcagatgacagaggcacagtctat
tccaagtctctagaacgccatctgtacactggaggagagacagacttcaccaacgtcact
tccctcagaggagtctacactactagtgtgctagctgaggataactctgtacagacagta
ataacgtttgaccagggaggagagtgggttcctttgaagaaaccagaaaacaccaagtgt
gattccacagccaaagatgcagaaatgtgtagtctgcatattcatgcttcatacagtacc
tccatgaaggtcaacgtacccatgccacctctcagtgaacccaatgctgttggacttatc
ttggctcatggcagcgtaggggacgccatctccatgcagacgcctgatgtgtatgtgtct
gatgatggaggctacacctggctgcaggctctaaaggggccacatcactatgccatcctg
gattctggaggcctgctggtggccgtggagcacaaccaggccaaacccatctccgagatt
aagttctccaccgatgagggccaatgctggcatgttcacacgttcacccagacgccgatg
tacttcacaggcttggcctctgagcctggtgcccgctcagtgaacgtcagtctctggggt
tatgaagacgctatgatcagccactgggtcacctacactattgactttaaagacctgcta
aaacgaaattgcgagagtgatgattatgttcaatggctggcacactctgatgacatcagc
gacccagaagacggttgcatgctgggctacaaagagcgtttcctgcgggtgaggaaggac
tctgtttgctggattggacgggaatatgtagttaacaaacagcccacgccgtgtgtctgc
acacttgatgacttcctgtgtgactttggatactaccgtaaagaaaagagctctgagtgt
atagaacaggctgaactcaaaggccatgatctggagatctgcattcatgggaagaaagag
cagctccagaccagtggataccgaaagattccaggtgataagtgtgaaggagggaaacaa
ccagaaagaaaggtgatcgacctgagcaagagatgcgtcagtgacctgcttgacccccag
ccgctgaataatccacagtcagagcaatccacctctcacacggctcctatcattgccatg
gtcatcgccatcctgctgaccggtctagtgtttggggcactgttcgtaaagaaatacgtc
tgcggtggaaggttcctggtccacagatactcagtcttacaacacaatgtggaagccaat
ggtgttgatgaaccgctggagacagatgtggttggagcaccgaagaatgacttccatgat
gattcagatgaggacctgctggagtaa

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