Danio rerio (zebrafish): 799435
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Entry
799435 CDS
T01004
Symbol
arhgef10la
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like protein isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
799435 (arhgef10la)
03036 Chromosome and associated proteins [BR:
dre03036
]
799435 (arhgef10la)
Membrane trafficking [BR:
dre04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
799435 (arhgef10la)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
799435 (arhgef10la)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
WD40_CDC20-Fz
Beta-prop_RSE1_2nd
CFAP43_N
SOS1_NGEF_PH
DUF7675
RHG20_PH
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
799435
NCBI-ProteinID:
XP_009304376
ZFIN:
ZDB-GENE-120814-1
Ensembl:
ENSDARG00000088630
UniProt:
A0A8M3BDR1
LinkDB
All DBs
Position
11:complement(29331143..29563394)
Genome browser
AA seq
1342 aa
AA seq
DB search
MSTVSSQQLAEDVEDNEQRKGFRCKDEISKEESRTPSGDNTSKYSELQILSSALEATQKK
QSDLFQDASTSSPAGCTNTHSEKPMSTASSHQQLGEKVEDKEQREKSRCKDEISKTDAGD
ETSTCTVWTCSSDLESTPDKQADYSSQATMTSYPVECSTINNATDSKRDQASTDSTAPED
LNEEEDHTCTVVKIQRDTCTIKTNAGTEDFRHSPSQNAEGNVSTESEHQTAGPEVIYDDV
PSEDLSSGEADLIYEDVQKEEGLQGPNNGWSSSEFESYDEQSDSERPPTRSKLSPDVRRL
RDRYTRTKQELAMRLGGKHQVHQLMRAARSGTKDGLEKTKIAVMRRVSFLHKKDHSDDTE
DDTGYLDVMVSEAKHPPAQLGPMPDGLSSQQIVRRHILSSIVQSERSYLDSLKRILQEYQ
RPLMEAEPRILSVRKIRPIFFRLREITQCHSMFQIALASRVAEWDSCEKIGDLFVASFSK
SMVLDVYSDYVNNFTNAMALIKKACLSKPAFLEFLKRKQASSVDRITLYGLMVKPIQRFP
QFILLLQDMLKNTPTGHVDRLPLQLALTELETLAEKLNEQKRVADQITETQQLARCVSDR
SLSKLLNSEQSSLILCETLIETVYGERGQVLKSKERKVFLFGDVLICANINVKGPPDISS
LVPVGPKYTLKWSAPLQQVQVVEVGQEASQSKDTLYQLGSVKRPGSSFGQGSIILGPPRL
YHELQELQHDLSVVEQVTLLVGTLQGTYQNLNTTVAQDWCLALQRLIRIKEDQIQNANKC
RLRLQVPGRPDKSGRPVSFTVVFNTPSPVSKISWANRFHLAKIALRDENTPGWFFAEDDG
KTKAPFWCPLLACRMPVFTSKAPEWKLEAALHNPVQCALLGFSAASTSLPQGYLWVASGA
DSTQGQVDIFSLNRPTPRPVKSLQMGAQVRCLEYVPEPSPSEDAETSLHSSTEVGNTICV
GLDDGSILVYGSMDSAAQCLVTLHNPEGCPVLCLKHCNNVLFAGLRDGKLMVYERHHRGG
LWNQDTSRKVTIGSHPIRTLLALENSVWASCANTVTVVNGSSLSTQRFEVHQDPMVSVAH
MVRAGGGVWMAFSEGSSIRLFHTETLEHLQEINISTPSSFYNPSQKSMRVTSLLICQGLL
WVGTAQGIIITLPVPKLEGIPKITGKGMMSFNAHCGPVDFLVALSSTLSPDLLKRDSVIE
GHDSGCGVEDRSDSSSQESLQQPSVSTQVDGKGKGRGVLLQYRLRSTSGLPGRPLTARGD
EASDSSLESLEHSMEDGSIYELSDDPDMWVRGRPCEREGVRRDRVTSVAVISGGKGFRRL
REGSVTATMESTLMIWQLPLTV
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atgtccacagtttcatctcagcagctggcggaggatgtggaggacaacgagcagaggaag
ggattcagatgtaaagatgagattagcaaagaagagagcaggactccatctggagacaat
acaagcaaatacagtgaactccagatactttcaagtgcactagaagcaacgcagaaaaaa
caatcagatctattccaagacgccagtacaagttcccctgctgggtgtaccaatactcac
agtgaaaaacccatgtccacagcttcatctcatcagcagctgggggagaaagtggaggat
aaagagcagagagagaaatccagatgtaaagatgaaatcagcaagactgacgctggagat
gagaccagcacttgtacagtctggacctgctcaagtgacttagaatcaactccagataag
caggcagattattcatcccaagccacaatgacaagttaccctgtggagtgctcaactatt
aacaatgcaacagacagtaaaagagatcaagcttcaacagactctacagcaccagaggat
ttaaatgaagaggaagaccacacttgcactgtggtgaagatccagagagatacatgcact
attaaaacaaacgcagggacagaggatttcagacacagcccatcacaaaatgctgaagga
aatgtgtctacagaatcagaacaccagacggctggtccggaggtgatctatgatgatgtt
cccagtgaagatctgtcttcaggagaagctgacttgatatatgaagacgttcagaaagag
gagggcttgcaagggcccaataatggctggagctcaagtgagtttgaaagctatgatgag
cagtctgactctgagaggccgccaacccgcagcaagctctcccctgatgtgcggcgactg
agagaccgttacaccaggaccaaacaggagctagccatgagactggggggcaaacaccag
gtccatcagctgatgcgggcggcacgcagcggaacgaaagatggcctggagaagaccaaa
atcgctgtgatgaggagagtttcattcctacataaaaaggaccactcagatgacaccgag
gatgatacagggtatctggatgtgatggtatctgaagcaaaacacccacctgcacaactg
ggaccaatgccagatggactaagcagccagcagattgttagacgccatattttgagctcc
attgtgcaaagtgaaagaagttacctggactctcttaaaagaatcctgcaggaataccag
cgaccgctgatggaggctgagcctcggattctcagtgtcaggaaaatccggccaattttt
ttccgtctacgagagatcacgcagtgtcactccatgttccagatagccttggcatctcgg
gtggccgaatgggactcttgtgaaaaaattggggacctgtttgtagcttcattttccaag
tctatggtgctggacgtttatagtgattacgtcaataacttcaccaatgccatggccctc
attaagaaagcctgcttgtctaaaccagcatttctggagttcctcaagaggaagcaggca
tcgagcgttgatcgcataaccctttatggtctgatggtgaagcctattcagcgctttcca
cagttcattctcctcttgcaggacatgctgaagaacactcccactggccatgtggacaga
ctgcccttgcaactggctctgactgaattggagaccctcgctgagaaactcaatgagcag
aaaagggtggctgatcagatcactgagacacagcagctggcccgctgtgtcagtgaccgt
tctctcagcaagttgctcaactcggagcagagctctttgatcctttgtgagacgctgatt
gagacggtgtacggtgaacgaggacaggtcctcaagtctaaggagcggaaagtctttctc
ttcggtgacgtgctcatctgtgccaacatcaatgtcaaggggccccctgacatcagcagt
ttggtcccagttggtcccaagtacaccctcaaatggagcgcccccttacagcaggtccag
gtagttgaagtgggtcaagaagcatcccaatccaaggacacactttatcagcttggaagt
gtcaagcgtccgggcagctcttttggacaaggaagtatcattctcgggccgccccgcctg
tatcacgaactgcaggagctgcagcacgacctctcagtagtggagcaggtcactctgctc
gtgggaactttacagggaacgtatcagaatctgaacaccacagtggcgcaggactggtgt
ttggcactgcaaaggctgatccgcatcaaagaagaccaaattcagaacgccaacaagtgc
cgtttacgactgcaagttcctggcagaccagacaagtccgggcgtcctgtgagcttcacg
gtggtcttcaacacaccgagccccgtcagcaagatttcctgggccaaccggttccacctg
gcgaagatagcactgagagacgaaaacacaccaggttggttctttgcagaggatgatggc
aagacaaaagctccattttggtgtccactgctggcctgccgcatgcctgttttcacctct
aaagccccggaatggaagctggaggctgctcttcataatcctgttcagtgtgctttactc
ggtttctcagcggcaagcacttcacttcctcaaggctacctgtgggtagctagtggagct
gattccactcaaggccaggtggacatcttctccttgaacagacccacacctcggcctgta
aaatccctccagatgggagctcaagtgaggtgtctggagtatgtgcctgagcccagccca
tcagaggatgcggaaaccagcctgcacagctccactgaagttggaaatactatctgtgta
ggacttgatgatggcagcatcttggtctatggcagtatggactccgctgcccagtgtctt
gtgactctccataatcctgagggctgtccagttttgtgtctcaaacattgcaataatgtt
ctgtttgctggcctgcgggatggaaagctcatggtgtatgagagacatcacagaggggga
ctttggaaccaagacacctctagaaaagtaacaattggttcacatcccatcaggactctg
ctggctttggagaactcggtctgggctagctgtgctaacacagttactgtagtcaacggc
tccagtttgtccactcagagatttgaggtccatcaggacccgatggtgagtgtggcccac
atggtgcgagccggaggtggtgtatggatggctttttctgaaggctcttctatacgtttg
ttccatacggaaacactggagcacctgcaggagatcaacatttccacaccctcgtcattt
tacaaccccagtcaaaagagcatgagggtcaccagcctgttgatttgccaggggctgctg
tgggtaggcactgctcagggtattatcatcaccctgccagtgcctaagctggagggcatc
cccaaaattacaggtaaggggatgatgtccttcaatgctcactgcgggcctgtggatttc
ttagttgccctttccagcacattgtcccctgatcttctaaaacgggactctgtgatagaa
ggtcacgattcgggctgtggagtggaggaccgcagcgactcatcctctcaggaatccctc
cagcagcccagtgtttctacccaggtggatggaaaagggaagggacggggtgttttacta
cagtaccgtctacgctcaacctcagggttacccggacggccattaaccgcacgaggagac
gaagcctcagactcatctctagagtctctggagcacagcatggaagatggctcaatttat
gaactcagcgatgatccagacatgtgggtccggggtcgaccctgcgagagggaaggggtg
aggcgggacagggtcacctcggtcgcagtcatttcgggaggtaaaggtttccgtcgacta
agggagggatcggtgacagccactatggaaagcacacttatgatctggcagcttcctctc
actgtttga
DBGET
integrated database retrieval system
