Danio rerio (zebrafish): 799538
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Entry
799538 CDS
T01004
Symbol
gemin5
Name
(RefSeq) gem-associated protein 5 isoform X1
KO
K13133
gem associated protein 5
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
799538 (gemin5)
03041 Spliceosome [BR:
dre03041
]
799538 (gemin5)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
799538 (gemin5)
mRNA cycle factors
P-body specific factors
799538 (gemin5)
Spliceosome [BR:
dre03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
799538 (gemin5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_GEMI5
GEMI5_RBS
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_RIG_2nd
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_RIG_1st
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_Aladin
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_LRRK2
WD40_MABP1-WDR62_1st
MIOS_WD40
Beta-prop_ACSF4
Tricorn_2nd
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
799538
NCBI-ProteinID:
XP_001339880
ZFIN:
ZDB-GENE-031112-9
Ensembl:
ENSDARG00000079257
UniProt:
E9QH84
LinkDB
All DBs
Position
21:40070668..40114162
Genome browser
AA seq
1440 aa
AA seq
DB search
MHERHLPASPNWYCSRCSDINSKGVFGFGAKNTVYLLNVTAASPAVTGELAGHTERVSGF
AFCPNEGQEHICCSTSDDKKVKIWDAEQKILLKEHNVHQNTITAVHWSPVQKLLLVTGDE
KGIVVCYWFSSNDTQSFFPEPRTIFCLSCSPHDENLIAVGYKDGMIAVIDISKKGEVVHR
LRGHDDEIHALAWCPRPREEPLYGRSEDNADGSSGVTEGAGAGCYLASGSRDQTMRIWST
ARGKGVMTLKLPFLKRRGAGVDPTVKERLWLTVHWPKERPSQIVSSCFGGEIVVWDLMKS
GKQKWSLLGSSSDGQNHSRIVFNMSSFRCGDRELLLSTSMDRDIKCWDLESLECCWTLPT
LGGFVYCLSFSPVGTGCLALGVGDSMIRVWNTLSIQNQYDIKTFWQGIKSKVTALAWHPL
KEGSLAFGTDDGKVGIYEVYSNKPPQISSTYHRRTVYSLSWGPPLPPMSFGGAGDKPAYS
LYSCAGEGVIFQHDPWKLSGEASNIDKLIRDTNNIKHKMPPHTDLSWKPDGSILAIGNED
GSIEVLKAPMLKLLCTVQQHHKIINSLRWHHQHSSQNELQYLLASGSSNATIYIHDLRSA
VESPSESPVSVTEPFRTLSGHTNKITGLAWSPHHDGRLVTVCYDGTAQVWDVLKEEPVCN
YRGHSGRLLCVQWSAVHPDLIWTGGDDFTLQEWAVSKQEHITPPKSKKRTEMEKKRVPQK
KPKKKKKAPGKGEMKAEESEMPLGEEVKGAAGSGAEEGQSDNEEEEEEKEYTDAPSVTGR
SRDSSVDTRASDRLHNGEKFSNAVKKEVKEEKKRDKIDLSLKKRKPRSILPLSTSMDHRP
KDELQQDCLTLAAVRHSHGRSRTCVPGAGDHIQLGLFTDRDALYRMMQEEEESHVEAAHY
DSVLYLRLWRGDLIGALNLAMEKGELTDHLLSLAPMAGYQVWLRTVEAYVKQLCHHEQFF
KAASHLLSIHKLYEAISLLKSHQFYREAIALARARLQPEDPVLKDLYMSWAAVLEKDGHY
ATAAKCYLATDSSFDAAKVIGKKGDVTSLKTAAHLAHITGEAELAHSLSLRCAKDLIATQ
DWTAAQDVLRTQDSLLGHRLVFSVNEILTQRLADTDVVSWSSSSSHWWSSSREEVFFSAV
LRVWQREFGVDPADHHKLKTLHQQLKAIENPPHTTTGPVKQLLSHISLDVTLCALSELLC
DWPSVVEELLRALSRASAAGSFTLMAELSLLLFPHGLESVALYKQKLDPSDERSLAISQS
IEAFICYPLMYEKWWTSTSTNNSISNGHRLTLADGDEEKCNGEAQSDGFWKILLSEPHAD
LQANQRAIAEIQKRVSSLIQQHSRCKDPETALEGSAGGTGSESLSALTAQVAEHHKALAA
VPEHIRKYPFPDVLECCIVLLHMEKHFNLIPQHICSEATALLRKYGTAESLSKAVRRLIH
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaaagacatctgccagcctctccgaactggtactgttcccgctgcagtgacata
aatagcaagggagtgtttggttttggagcaaagaatacagtgtatctgctgaacgtgact
gcagcatctccagcagtcacaggtgaactcgctggacacactgaaagagtttctgggttt
gcgttttgccccaatgaaggacaggagcacatttgttgcagcacttcagatgacaagaaa
gtcaaaatctgggacgctgagcagaaaatcctgttgaaagagcacaatgtccaccaaaac
accatcaccgcagtccactggtctccagtacagaagcttctgctggtcaccggagatgag
aaaggcatcgtggtttgctattggttcagcagtaatgacacccagagcttcttccctgaa
cctcgaaccatcttctgcttatcctgctctccacacgacgaaaacctcatcgcagtgggg
tataaagatggaatgatagcagtgatcgacatcagtaagaaaggagaggtggttcaccgg
ctgagaggtcatgatgatgagattcacgcactggcatggtgccctcgacccagagaagag
cctctttatgggcgatctgaagacaatgcagatggaagcagtggggtgacagaaggagca
ggagcaggctgttacttggcctcgggtagtcgagatcagaccatgcggatatggagcaca
gccagaggaaaaggtgtaatgaccctgaaacttcccttcctaaaaagaagaggagcagga
gttgatccaacagtgaaggaaagactctggctgactgtgcactggccgaaagagagacct
tcgcagattgtgtccagctgttttggtggtgagatcgtggtctgggatctcatgaagtca
ggcaagcagaagtggagtctgctgggcagttcttcagatggacagaatcacagccgaatt
gtcttcaacatgagctcctttcgctgcggggacagagaacttctgctcagcacctccatg
gacagagacattaagtgttgggacctggagtctctggagtgctgttggactctgcccact
ctgggtgggtttgtgtactgtctcagcttctctccggtgggcacaggctgtctggctcta
ggtgtcggggacagcatgatccgcgtgtggaacaccttgtctattcagaaccagtatgac
atcaagacattctggcaaggcatcaaatctaaagtcacagctttggcatggcatccactt
aaagaaggctcgctggcttttggtaccgatgatggtaaagttggcatctatgaggtttac
tctaacaaacctccgcaaatctcaagcacttaccaccgcaggactgtctactccctctca
tggggtcctcctttgccacctatgtcttttggtggagctggagacaagccggcctacagt
ttgtacagttgtgctggagagggagtcatttttcagcacgacccctggaaattgtctggg
gaggccagtaacattgacaaactcattcgagacaccaacaacatcaaacataagatgccc
ccacacacagacctcagctggaagccagacggcagcattttggccattggaaatgaagat
gggtccatagaggtattgaaggctccaatgctgaagctcttatgtacagtgcagcagcat
cataaaatcattaattcactgcgctggcaccatcagcactcatctcaaaatgagctgcag
tatctgctggcatcaggctccagtaacgccacaatctacattcatgacctcagaagcgcc
gtagaaagcccatcagaaagtccagtttcggtgactgaacctttcaggactctctctggt
cacacaaacaaaatcactggtttagcctggagcccccatcatgatggtcgtctggtgacg
gtttgttatgatggaaccgctcaggtgtgggatgtgttgaaagaggagccggtgtgtaac
tacaggggtcactcgggtcgtctgctgtgtgttcagtggtctgctgttcaccctgacctg
atctggactggcggagatgacttcacccttcaggaatgggccgtttcaaagcaggaacac
atcacaccgcctaagagtaagaagcgcacagagatggagaaaaagcgagtgccgcagaaa
aagcccaagaagaaaaagaaggcgccaggaaagggtgagatgaaggcggaggaaagtgaa
atgcctttaggtgaagaagtgaaaggagcagcaggcagcggagcagaagaaggccaatcg
gacaatgaggaggaggaggaggagaaagaatacacagacgctccatccgtcacgggcagg
tccagagacagcagtgtggacacacgtgccagcgatagactgcacaacggagagaagttc
agcaatgctgttaagaaagaggtcaaagaggagaagaaaagagacaaaatagatttgtct
ttaaaaaagagaaagccgcgctctattcttcctctcagcacttcgatggatcaccgaccc
aaagacgagcttcagcaggactgcctgactctcgctgctgtaagacactcacacgggcga
agcaggacgtgtgttccaggagctggagatcacatccagctcggtctcttcacagaccga
gacgctctctacaggatgatgcaggaggaggaggagagtcacgtggaagctgctcattat
gactcagtgctgtatctgagactgtggagaggagacctgattggtgccttaaatctggcc
atggagaaaggagaactgaccgatcatctgctcagtttagctccaatggctggttaccag
gtgtggttgaggaccgtggaggcgtacgtcaagcagctctgtcatcatgagcagttcttc
aaagcagcttcacatctcctgtccatacacaaactctacgaggccatcagtctcctgaag
agccaccagttttaccgggaagccattgctttagccagagccagactccagcctgaggat
ccagtgctgaaagatctgtacatgagctgggctgcggtgctggaaaaggacggacactac
gctactgctgctaaatgttacctggccacagactccagctttgatgcagctaaagtgatt
gggaagaaaggggatgtgacatcactgaagacggcggctcacctggcacatataacagga
gaagcagagctggcacactccctctctctgaggtgcgccaaagacctgatcgcgacccag
gactggaccgcagcacaggatgtcttgaggacacaagactcacttttgggtcaccggctg
gtgttcagtgtgaatgagattctcactcagagactggcggacacagatgtggtcagctgg
agttcgtcatcttcccactggtggtcttcgtcgcgtgaggaggtcttcttctcggcggtg
ctcagagtgtggcagagagagtttggagtggatcctgcagaccatcacaaactaaagact
ctccatcaacagctgaaagccatcgaaaatcctccgcacaccactactggacccgtcaaa
caactgttatctcacatctcattggacgtgactctgtgtgccctgagtgagctgttgtgt
gattggccgtctgttgttgaggagttgctgcgagctctgagtcgagcttcagcagcggga
agcttcacactgatggcagagctgagcctgctgctgtttccacacggtttggagtcggtg
gcgctttacaaacagaaactagacccgtctgatgagagaagcttggcgatttctcaaagc
atcgaggctttcatctgttatccactcatgtatgagaaatggtggacgtcaacgtcgacc
aataacagcatcagcaacggtcatcgtttaactctggctgacggagatgaagagaagtgt
aacggagaagctcaatctgatggcttctggaagattcttctgtcagaacctcacgctgat
ctgcaggccaaccagagagccatagcggagattcagaaaagagtcagcagcctgattcag
cagcacagcaggtgtaaagacccagagacggctctggagggatctgctggaggaacgggc
agcgagtctctatctgcgctgaccgcacaagttgctgaacaccataaagctctcgccgcc
gtcccggaacacatcaggaaatacccgtttccggatgtgctggaatgttgtattgttctt
ctgcacatggaaaaacactttaatctgattccacagcacatctgctctgaagccacagct
ttattgcgcaaatatggaactgcagagtctctcagtaaagctgtgaggagactcatacac
tga
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