Danio rerio (zebrafish): 80965
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Entry
80965 CDS
T01004
Symbol
hdgfl2
Name
(RefSeq) hepatoma-derived growth factor-related protein 2
KO
K25065
hepatoma-derived growth factor-related protein 2
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dre03400
]
80965 (hdgfl2)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
80965 (hdgfl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Motif
Other DBs
NCBI-GeneID:
80965
NCBI-ProteinID:
NP_001002037
ZFIN:
ZDB-GENE-040426-2104
Ensembl:
ENSDARG00000019530
UniProt:
Q5XXA7
LinkDB
All DBs
Position
22:complement(22233829..22259303)
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AA seq
662 aa
AA seq
DB search
MPHNFRPGDLVFAKMKGYPHWPARIEDVADGAVKPPPNKIPIFFFGTHETAFLAPKDLFA
YEKNQERFGKPNKRKGFNEGLWEIQNNPHASYNTPAAASSSDSEDNQPAAASDAEEEEEA
VVPRKAETGSDDSDSGSEDQKKPAVKRKAPAPKRPPVKKARASSSDRDGEESGSPSEPEP
SPSSDSDSGKNSDQDFTPQKESGGRGGKKPAGRGRRKKASSGSDSDSGSQSDQKAARSDS
EDEKPRPAASGSESQSGSKSDSDSEPPPPPPPTRKAPQGRKKAEKPPPKPRARKPKPAPE
RAPSSSSDSDSDSDTDRVSEWKKRDEERRKELEERRKREEAEELRRLREREKEEEEKRKK
DKETKVRRGSSSSGSSSSDDEVDDHPLKKSKKPPPPPIPAPSDSDSPPPSELKKKKESQK
GRQKKEKEVKEKKERPIKEKKPQRSEEKHKAKPKPEKPKRKPVRPPEKKVEKKKEPSPEE
KLQKLHTDIKFALKVDNPDIEKCLQALDELSSVQVTTHILQKNADVIATLKKIRRYKASN
AVMEKATAVYNKLKLQFIGKIETGKPKPNEKNQEEQDAQNTDDSKPVNGESEGERKDVSE
SESNSKPTDQDNPDENKSPNGIRPDPDEPADQLNDSTEADPTADADVKEDSREQDEQMSS
ES
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacaacttccggcccggggatcttgtcttcgccaaaatgaagggttaccctcac
tggccggcccggattgaagatgttgcagacggggctgtcaaaccacctcctaataagatc
cccattttcttctttgggactcatgaaacagcattccttgcacccaaagacctttttgca
tatgaaaaaaaccaggaacgctttgggaaacccaacaaaaggaaagggttcaacgaaggc
ttatgggaaatccaaaacaacccccatgcctcctataacacccctgctgctgcatcatca
tcggacagtgaggacaaccaacctgctgctgcaagtgatgcggaggaagaagaggaagca
gtggtaccaagaaaagccgaaacgggaagtgatgattctgactccgggagtgaggatcaa
aagaagcccgcagtgaagcggaaagctcctgctccaaagcggccaccagtgaagaaagca
cgggcatcatccagtgatcgagatggagaggagagtggatctccctcagaaccagaaccg
tcacccagctcagactcggactccggcaaaaacagtgaccaggacttcacaccacagaaa
gagtcaggcggtcgaggaggcaaaaagccagctggcaggggcaggaggaagaaggcgtct
tctggctctgattcagactctgggtctcagtcggatcagaaggctgccaggagcgattca
gaagatgaaaagccacgaccagctgcttccggatctgaatcgcagtctggatccaaatcc
gactccgattcagagcctcctcctcctcctccccctacaagaaaagccccacaaggacgc
aagaaagcggagaaaccaccaccaaagccacgggcaaggaaacccaaaccagctccagaa
cgagctccttcctcatcatcagatagcgatagtgacagcgacacagaccgcgtcagtgag
tggaagaagagagacgaggagcggaggaaggagctggaagagcggagaaagagagaggag
gccgaagagctccgccggctccgggagcgagagaaagaggaggaagaaaaaaggaaaaaa
gacaaagagaccaaggtgaggagaggaagcagcagcagtggtagcagctcctcggacgat
gaagtagacgatcatcctctcaaaaaatctaagaaacctccgcctccacccatccctgca
ccgtctgactcggactcgccacccccctcagagctgaaaaagaaaaaagaaagccaaaaa
gggcggcaaaagaaggagaaggaggtgaaggagaaaaaagagagaccgatcaaagagaag
aagccacagagatcagaggagaaacacaaagcaaagcctaaacccgagaagccgaaacgg
aagccggtgcgtccacctgagaagaaagtagagaagaaaaaagagccctcgccagaagag
aagctacagaagctccacacagacatcaagtttgcactaaaagttgacaacccggacatt
gagaagtgtctacaagccttggatgagctcagctcggtacaagtgaccactcacatcttg
cagaagaatgctgacgttattgccaccctcaaaaagattcgtcggtacaaagccagcaat
gcagtcatggagaaggccaccgcagtctataataaactaaagcttcagttcattggcaaa
attgagactggtaaaccaaaacccaatgaaaagaatcaagaagagcaagacgcacaaaac
acagacgattccaaaccagtgaatggagaatccgaaggagagagaaaagacgtttctgaa
tctgaaagcaattccaaacccacagaccaagacaacccggatgagaacaaatccccaaat
ggcatcaggcctgatccagatgagccagcagatcagctaaatgactctacagaggcggat
cccacagcggacgcagatgtaaaagaggacagcagagagcaggacgagcagatgtcgtct
gagagctaa
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