KEGG   Danio rerio (zebrafish): 81585
Entry
81585             CDS       T01004                                 
Symbol
cldnf
Name
(RefSeq) claudin f
  KO
K06087  claudin
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03272  Virion - Hepatitis viruses
dre04382  Cornified envelope formation
dre04514  Cell adhesion molecules
dre04530  Tight junction
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    81585 (cldnf)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    81585 (cldnf)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    81585 (cldnf)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    81585 (cldnf)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:dre03037]
    81585 (cldnf)
   04147 Exosome [BR:dre04147]
    81585 (cldnf)
   04515 Cell adhesion molecules [BR:dre04515]
    81585 (cldnf)
Cilium and associated proteins [BR:dre03037]
 Other cilia and associated proteins
  Stereociliary proteins
   81585 (cldnf)
Exosome [BR:dre04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   81585 (cldnf)
  Exosomal proteins of colorectal cancer cells
   81585 (cldnf)
Cell adhesion molecules [BR:dre04515]
 Immunoglobulin superfamily
  L1 family
   81585 (cldnf)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 MFS_MOT1 TMEM_230_134 DUF1634
Other DBs
NCBI-GeneID: 81585
NCBI-ProteinID: NP_571841
ZFIN: ZDB-GENE-010328-6
Ensembl: ENSDARG00000043133
UniProt: F1QB03
LinkDB
Position
15:complement(2650787..2652582)
AA seq 233 aa
MGRIAKEVAGQTLCFIGFVGICICCGIPMWRVTTYIGANIVTGQIVWDGLWMNCVMQSTG
QMQCKIQDSIMNLTQDLQVARALVIISILIGFMGMLLTFIGGQCSSCLKNESSMAKVLIL
GGILCIVAGVLLLIPVCWSAAYTISDYVSVTTIQTQKRELGASIYVGWGASAFLLFGGII
LCTSCPPRENIYPQYPGMYPYQGPVYGHQYAPSTVYKPYHPPVAYTPAPRQYL
NT seq 702 nt   +upstreamnt  +downstreamnt
atgggaaggattgctaaagaagtggccggccagaccctgtgcttcatcggttttgtgggc
atctgcatctgctgtggcattcccatgtggcgggtcaccacctacatcggcgccaacatc
gtgacaggccagatcgtgtgggacggcctgtggatgaactgcgtgatgcagagcacggga
cagatgcagtgcaaaatacaggactccatcatgaacctgacccaggatctgcaggtggcg
cgcgcactggtcatcatctccatactgatcggattcatgggcatgctgctgacgtttatt
ggtggacagtgcagtagctgcctgaagaacgagtcctccatggctaaagtgctcattctg
ggaggcatcctgtgcattgttgctggagtcctgcttctgattcctgtgtgctggtctgcg
gcgtacaccatctccgattatgttagtgtgaccaccattcagacgcaaaagagagagctt
ggagcgtctatatatgtcggctggggtgcttcagcgttcctgttattcggagggattatt
ctgtgcacttcttgcccacccagagaaaatatctacccacagtacccaggcatgtacccg
taccagggaccggtgtatgggcatcagtacgctccgagtacagtttacaaaccgtatcat
cctcctgttgcttatacacctgctccaaggcaatatctttaa

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