Devosia rhizoryzae: JI748_03960
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Entry
JI748_03960 CDS
T09886
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
drh
Devosia rhizoryzae
Pathway
drh00300
Lysine biosynthesis
drh00550
Peptidoglycan biosynthesis
drh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
drh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JI748_03960
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JI748_03960
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
drh01011
]
JI748_03960
Enzymes [BR:
drh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
JI748_03960
Peptidoglycan biosynthesis and degradation proteins [BR:
drh01011
]
Precursor biosynthesis
Amino acid ligase
JI748_03960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF3663
Motif
Other DBs
NCBI-ProteinID:
QQR41097
UniProt:
A0ABX7CE55
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All DBs
Position
789128..790564
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AA seq
478 aa
AA seq
DB search
MSVTQLLEGSGARPKKGLGAVFGLNSDSRRIEPGDIFFALPGNKVHGNQFVQSAVDRGAL
AVVTDIAPPGDPGVPVIIVKDVRAAYARAASRVFEPQPEILVAVTGTNGKTSVASFVRQI
WDHAGVPGASIGTLGIETSKRTIEGALTTPDSRTLHQAMRALKAQGIDHVALEASSHGLD
QRRLDGTHFEAVAFTNLSRDHLDYHKDMDEYRSAKLRLFTDLLVDGGAAIVNVDDPEHEQ
FMFAALGASATLLTVGREGAYIEILSIKPEGYGQRVEVRHIGEKVNFHLPIPGEFQVSNA
LIAAALAMSAGVDKADAFAALPELVGARGRLELVAEHNGAAIFVDYSHKPEALRMALQTL
RPYVTGELKVVFGCGGDRDKGKRPQMGEIASDLADVVIVTDDNPRTEDAATIRAEVMAGA
KGAQEIGDRKTAIREAVRSLKKGDVLLVAGKGHETYQIIGTTKSHFSDHEEVLAAVKG
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atcagcgtcactcaactgctcgaaggctccggcgcccgcccaaaaaagggattgggcgcg
gttttcgggctgaactcggacagccggcggatcgagccgggcgacatcttcttcgcgctg
cccggcaataaggtgcatggcaaccagttcgtgcaaagcgcagtggaccggggtgcgctg
gcggtggtgaccgacatcgctccgcccggcgatccgggcgttccggtgattatcgtcaaa
gatgtgcgcgccgcctatgcgcgggccgcgagccgggtgttcgagccgcagccggaaatc
ctcgttgccgtgacgggtaccaatggcaagacttcggtggcgtccttcgtgcgccagatc
tgggatcatgcgggcgttcccggcgccagcattggcacgctcgggatcgagaccagcaag
cgcacgatcgagggcgcgctgacgacgccggactcgcgcacgctgcatcaggcgatgcgg
gcgctcaaggcccagggtatcgaccatgtcgcgctggaagcttcgagccacggcctcgac
cagcggcggttggacggcacgcatttcgaagccgtggcctttaccaatctcagccgcgac
cacctcgactaccacaaggacatggacgaatatcgcagcgccaagctgcggcttttcacc
gatcttctggtcgatggcggcgcggcgatcgtcaatgtcgacgatccggagcacgagcag
ttcatgtttgcggcgctcggcgccagtgcgacgctgctgacggtgggacgcgagggcgcc
tatatcgaaatcctctcgatcaaaccggagggctatggccagcgcgtcgaggtgcggcat
atcggcgagaaggtcaatttccatctgccgatcccgggcgagttccaggtttcgaacgcg
ctgatcgcggcggctctggcgatgtcggcgggtgtcgacaaggcggatgccttcgctgcg
ctgccggagctcgtgggcgcacgcgggcggctggagctggtggccgagcataatggcgcg
gcgattttcgtcgactattcgcataagcccgaagcgctgcgcatggcgttgcaaacgctg
cggccctatgtcaccggcgagctcaaggttgtgttcggttgcggcggcgaccgcgataag
ggcaagcggccacagatgggcgagatcgccagcgatctggccgatgtggtgattgtgacg
gatgacaatccgcgcactgaggatgcggcgacgatccgtgccgaggtgatggccggcgcc
aagggtgcgcaggaaatcggcgatcgcaagaccgccattcgcgaggccgtgcggtcgctc
aagaagggcgatgtgctgctggtcgcgggcaagggccacgagacgtaccagatcatcggc
acgaccaagtcgcatttctccgatcatgaggaagtgctggcggcggtgaaggggtaa
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