Devosia rhizoryzae: JI748_07820
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Entry
JI748_07820 CDS
T09886
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
drh
Devosia rhizoryzae
Brite
KEGG Orthology (KO) [BR:
drh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
drh03009
]
JI748_07820 (rlmC)
Enzymes [BR:
drh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
JI748_07820 (rlmC)
Ribosome biogenesis [BR:
drh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JI748_07820 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_4
Ubie_methyltran
PCMT
Phage_TAC_6
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
QQR40877
LinkDB
All DBs
Position
complement(1571796..1572977)
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AA seq
393 aa
AA seq
DB search
MSHEAMILGEAAQPAPSLLSGAMQCGYFDRFECRSCTLMGVPYGTQIDGKLAHARQLLAA
WPDAQWLPPMLSSPAAFRNRAKMVVGGTAENPTLGILDAAQHGVDLTGCGILAPELHVAF
APIKAFITLAHLTPYDVPTRRGELKHALLTLSPDSDLMLRFVLRSTEPLGRIRKHLPSLL
ATLPQLAVVSVNLLPEHKAVLEGDEEIMLHGETLAMRLGGHTLHLRPASFFQTNTEIAAA
LYAQAREWIDETSAHSVWDLYCGVGGFALHVAGPSRHVHGVEISAAAIDSARLSAAEAGL
TNVTFTVGDATALSAAEPPDAIIVNPPRRGLGAQLCATLEASGVQTIVYSSCNAVTLARD
IAAMPSYRPQRIRLFDMFPQTDHYEVMVLLARV
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
ttgagccacgaagcgatgatcctgggggaggcggcgcagccggctccctcgctcctgagc
ggcgcgatgcagtgcggctacttcgaccgcttcgagtgccgctcctgtacgctgatgggc
gtgccttatggcacccagatcgacggcaagctggcccatgcgcgccaactgctggcggcc
tggcccgatgcgcaatggctgccgccaatgctcagcagccccgccgccttccgcaatcgc
gccaagatggtcgtcggcggcactgcggagaatccgaccctcggtattctcgacgccgcg
caacacggcgtcgatttgacaggctgcggcattctagcccccgaactgcatgtcgccttc
gcaccgatcaaagccttcattaccctggcacaccttaccccctatgacgtgcccacccgc
cgcggcgagcttaagcacgccctgctgaccctttcccccgacagcgacctgatgctgcgc
ttcgtcttgcgctccacggagccgcttggccgcattcgcaagcatctgcccagccttctc
gccaccctgccgcagctcgcggtcgtcagcgtcaatctcttgcccgagcataaggccgtc
ctcgaaggcgacgaagagatcatgctgcatggcgagaccctggccatgcgcctcggcggc
cacacgcttcatctgcgccccgccagcttcttccagaccaataccgagatcgccgccgcg
ctttatgcccaagcccgcgagtggatcgacgaaaccagcgcgcattccgtctgggatctc
tattgcggcgtcggcggcttcgccctccacgtcgccgggccgagtcgccatgtgcacggt
gtcgagataagtgccgccgccatcgactcggcacgcctcagcgcagccgaagccggcctc
accaacgtcacgtttaccgtcggcgacgccacggctctcagtgctgccgagccacccgac
gccatcatcgtcaacccgccgcgccggggcctcggcgcccagctctgcgccacgctcgaa
gcctcgggcgtccaaaccatcgtctattccagctgcaacgccgtaacgctcgcccgcgac
attgccgccatgccgagctaccggccccagcgcattcggctcttcgacatgttcccgcag
accgaccactacgaagtcatggtgctgctggcgcgcgtctga
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