Desmodus rotundus (common vampire bat): 112310458
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Entry
112310458 CDS
T05907
Symbol
KDM2B
Name
(RefSeq) lysine-specific demethylase 2B
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
dro
Desmodus rotundus (common vampire bat)
Pathway
dro03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dro00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112310458 (KDM2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dro03000
]
112310458 (KDM2B)
04121 Ubiquitin system [BR:
dro04121
]
112310458 (KDM2B)
03036 Chromosome and associated proteins [BR:
dro03036
]
112310458 (KDM2B)
Enzymes [BR:
dro01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
112310458 (KDM2B)
Transcription factors [BR:
dro03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
112310458 (KDM2B)
Ubiquitin system [BR:
dro04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112310458 (KDM2B)
Chromosome and associated proteins [BR:
dro03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
112310458 (KDM2B)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
112310458 (KDM2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
F-box-like
JHD
F-box
Cupin_8
JmjC
PHD
AppA_SCHIC
Motif
Other DBs
NCBI-GeneID:
112310458
NCBI-ProteinID:
XP_024422443
LinkDB
All DBs
Position
Unknown
AA seq
1278 aa
AA seq
DB search
MEAEKDSGRRLRPIDRQRYDENEDLSDVEEIVSVRGFSLEEKLRSQLYQGDFVHAMEGKD
FNYEYVQREALRVPLIFPEKDGLGIKMPDPDFTVRDVKLLVGSRRLVDVMDVNTQKGTEM
SMSQFVRYYETPEAQREKLYNVISLEFSHTKLEHLVKRPTVVDLVDWVDNMWPQHLKEKQ
MEATNAIAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIPPTLHNL
ALYEEWVLSGKQSDIFLGDRVERCQRIELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILH
SFNVPMQLRIYEIEDRTRVQPKFRYPFYYEMCWYVLERYVYCVTQRSYLTQEYQRESMLI
DAPRKPSIDGFSSDSWLEMEEESCEQQPQEEEKEEEGEEEEEGADKVPKPSADGPASPTS
TPSEDQEPPGKKPKAPALRFLKRTLSNDSEDSVKSTTLPTEYPKTPTGSPTTEGSAKWTH
LTEFELKGLKALVEKLESLPENKKCVPEGIEDPQALLEGVKNVLKEHADDDPSLAITGVP
VVTWPKKTPKNRAIGRPKVKLGPASAVKLAANRTTAGARRRRTRCRKSLLSPALQPVLPH
TAVCLVCGEAGKEDTVEEEEGKFNLMLMECSICNEIIHPGCLKIKESEGVVNDELPNCWE
CPKCNHAGKTGKQKRGPGFKYASNLPGSLLKEQKMNRDNKEGQESAKRRSECEEAPRRRS
DEHPKKVPPDGILRRKSDDVHLRRKRKYEKPQEPSGRKRASTLQTSPGSSSHLSPRPPLG
SSLSPWWRSSLTYFQQQLKPGKEDKLFRKKRRSWKNAEDRMALANKPLRRFKQEPEDDLP
EAPPKTRESDHSRSSSPTAGPSTEGAEGPEEKKKVKMRRKRRLPNKELSKELSKELNQEI
QKTESSLANENHQPIKSEPESENEEPKRPLGLCERPHRFSKGLNGTPRELRHQLGPGLRS
PPRIISRPPPSVSPPKCIQMERHVIRPPPISPPPDSLPLDDGAAHVMHREVWMAVFSYLS
HRDLCVCMRVCRTWNRWCCDKRLWTRIALNHCKSITPLMLSGIIRRQPVSLDLSWTNISK
KQLSWLINRLPGLRDLVLSGCSWIAVSALCSSSCPLLRTLDVQWVEGLKDAQMRDLLSPP
TDNRPGQMDNRSKLRNIVELRLAGLDITDASLRLIIRHMPLLSKLHLGYCNHVTDQSINL
LTAVGTTTRDSLTEINLSDCNKVTDQCLSFFKRCGNICHIDLRYCKQVTKEGCEQFIAEM
SVSVQFGQVEEKLLQKLS
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagagaaagactctggaagaagattgcgcccgattgaccgccagagatacgac
gagaacgaggacttgtcggacgtggaggagatcgttagtgtccgcggcttcagcctggag
gagaagctgcgcagccagctgtaccagggggacttcgtgcacgccatggagggcaaagat
ttcaactacgagtatgtgcagagagaagctctcagggttcccctgatatttccagagaag
gatggactgggaattaagatgcctgaccctgacttcaccgtccgggacgtcaagctgcta
gtgggtagccggcggctggtggatgtgatggacgtgaacacacagaagggcacggagatg
agcatgtcccagtttgtgcgctactacgagacgccggaggctcagcgggagaagctgtac
aacgtgatcagcctggagttcagccacaccaagctggagcacttggtcaagcgtccgact
gtggtagacctggtggactgggtggacaacatgtggccccagcacttgaaggagaagcag
atggaagccacaaatgccattgcggagatgaagtacccgaaagtgaagaagtactgtctg
atgagcgtgaagggttgtttcactgacttccacatcgactttggaggcacttctgtttgg
taccatgttttccggggtgggaagatcttttggctgattcctccaaccctgcacaatttg
gcgctgtacgaggagtgggtgctgtcaggcaagcagagtgacatcttcctgggggaccgt
gtggagcgctgccaaagaattgagctgaaacagggctacacatttttcatcccttccggc
tggatccatgccgtctacactcctgtggactctctggtatttggcggaaacatcctgcac
agcttcaacgtgcccatgcagctgcggatctacgagatcgaggaccgaacgcgggtgcag
cccaaattccgttaccccttctactatgagatgtgctggtatgtcttggagagatacgtg
tactgtgtgacccagcggtcctacctcactcaggaataccagagagaatcaatgctgatt
gatgccccaagaaagcccagtatagacggcttctcatcggattcctggctggagatggag
gaggagtcttgtgagcagcagccccaggaggaggagaaggaggaggagggggaggaggaa
gaagagggtgcagataaagtgcccaagccgtctgccgatggtcctgcctcgcccaccagc
accccctcggaggaccaggagccccccggaaagaagcctaaagcccctgccctgcggttc
ctgaaaaggactttgtcgaatgactcagaggacagtgtgaagtccacgacgttgcccaca
gaataccccaagacgcccacgggctcccccaccactgagggctctgccaaatggacccac
ctcaccgagtttgaactgaagggcctgaaagctctggtggagaaacttgaatccctccca
gaaaacaagaagtgcgtccccgagggcatcgaagacccccaggcactcctggagggtgtg
aagaacgtcctgaaggagcacgcggatgacgaccccagtctggccatcaccggggtcccc
gtagtcacttggccaaagaagactccaaagaaccgggcgatagggcggcccaaggtgaag
ctgggccccgcctccgcggtgaagttggccgccaaccggaccacggcgggagctcgccgg
cgccggacgcgatgccgcaagtctctgctctccccggctctccagccagtgctgccccac
acagccgtgtgcctggtgtgcggtgaggcagggaaggaggacacggtggaagaggaagaa
ggcaagtttaacctcatgctcatggagtgctccatctgcaatgaaatcatccaccctgga
tgccttaagattaaggagtcagagggcgtggtgaacgatgagcttcccaactgctgggag
tgtccaaagtgtaaccacgccggcaagaccgggaaacaaaagcgtggccctggttttaag
tacgcctccaacctgcctggctccctgctcaaggagcagaagatgaaccgagacaacaag
gaaggccaggagtctgccaagcgcaggagcgagtgtgaggaggcgccccggcgcaggtcc
gacgagcaccccaagaaagtgcccccggacggcatcctgcgccgaaagtcagacgacgtg
cacctacggaggaagcggaaatacgagaaaccccaggagccgagtggacggaagcgagcc
tcgacgctgcaaacgtccccgggttcctcctctcacctctcgccgaggccccctctaggc
agcagcctcagtccctggtggagatccagtctcacttacttccagcagcagctaaaacca
ggcaaagaagataagcttttcaggaagaagcggaggtcctggaagaatgccgaggaccgg
atggctctagccaacaagccactccggcgcttcaagcaggagccagaggacgatctgcct
gaggcgccccccaagaccagggagagtgaccactcccgctccagctccccgacagccggg
cccagcactgagggtgcggagggtcccgaggagaagaagaaggtgaagatgcgccggaaa
cggcggcttcccaacaaggagctgagcaaggagctgagcaaggagctcaaccaggagatc
cagaagacggagagcagcctggccaacgagaaccaccagcctatcaagtcggagcccgag
agtgagaacgaggagcccaagcggcccctgggcctctgtgagcgcccccaccgtttcagc
aaggggctcaacggcaccccccgggagctgcggcaccagctagggcccggcctgcgcagc
ccaccccgcatcatctcccggcctccgccctccgtgtccccgcccaagtgcatccagatg
gagcgacacgtgatccggcctccgcccatcagccccccacctgactcgctgcccctggat
gatggggcagcccacgtcatgcaccgggaggtgtggatggccgtcttcagctacctcagc
caccgagacctgtgtgtctgcatgcgggtctgcaggacctggaaccgctggtgctgcgat
aagcggttgtggacccgcatcgccctgaaccactgcaagtccatcacgcccctgatgctg
agcggcatcatccggcgacagcctgtgtccctggacctcagctggaccaatatctccaag
aaacagctgagctggctcatcaaccggttgcctgggctccgagacttggtgctgtcgggc
tgctcgtggatcgcggtctcagccctctgtagctccagttgtccattgctccggactctg
gatgtccagtgggtagaagggctaaaggatgcccagatgcgggatctcctgtccccaccc
acagataacaggccaggtcagatggacaaccggagcaagctccggaacatcgtggagctg
cgcctagcaggcctggacatcacggatgcctccttgcggctcatcatccgccacatgcct
ctgctctccaagctccacctcggttactgcaaccacgtgactgaccagtccatcaacctg
ctcaccgccgtgggcaccaccacccgagactccttaaccgagatcaacctgtcagactgc
aataaggtcactgatcagtgcctgtccttcttcaaacgctgtggaaatatctgtcatatt
gacctgaggtactgcaagcaagttaccaaggaaggctgtgagcagttcatagctgaaatg
tctgtgagtgtccagttcgggcaagtggaagaaaaactcctgcagaaactgagttag
DBGET
integrated database retrieval system
