Dactylosporangium roseum: Drose_07600
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Entry
Drose_07600 CDS
T08480
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
dros
Dactylosporangium roseum
Pathway
dros03030
DNA replication
dros03410
Base excision repair
dros03420
Nucleotide excision repair
dros03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dros00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Drose_07600 (ligA)
03410 Base excision repair
Drose_07600 (ligA)
03420 Nucleotide excision repair
Drose_07600 (ligA)
03430 Mismatch repair
Drose_07600 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dros03032
]
Drose_07600 (ligA)
03400 DNA repair and recombination proteins [BR:
dros03400
]
Drose_07600 (ligA)
Enzymes [BR:
dros01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Drose_07600 (ligA)
DNA replication proteins [BR:
dros03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Drose_07600 (ligA)
DNA repair and recombination proteins [BR:
dros03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Drose_07600 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Drose_07600 (ligA)
MMR (mismatch excision repair)
DNA ligase
Drose_07600 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Drose_07600 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
HHH
PTCB-BRCT
BRCT_2
RNA_lig_T4_1
Motif
Other DBs
NCBI-ProteinID:
UWZ38112
LinkDB
All DBs
Position
1483392..1485479
Genome browser
AA seq
695 aa
AA seq
DB search
MSDLDAEPTLEARERHAELSRELDEHQYRYYILQSPSVDDSVYDRFMRELEAIEAEYPAL
ITPDSPSQRVGGTFSTDFAAVTHAERMLSLDNALNDAELDAWVERIERDAGQQPRYLCEL
KIDGLAVNLTYKKGRLVRAATRGDGRTGEDITLNVRTIRDVPERLTGDDLPALLEVRGEV
FFTLAGFEEVNAAQVAAGENPFANPRNAASGSLRQKDPRITASRPMRMLVHGFGAREGFN
PVSQSEAYELMHAWGLPTSERWKVFDDLKGVRSYIADYGDKRHKIEHEIDGVVVKVDQMS
IQRRLGSTSKAPRWAIAFKYPPEEAMTKLLDIEVNVGRTGRVTPFAIMQPVFVGGVTVAQ
ATLHNAQEVVRKGVLIGDTVVIRRAGEVIPEVLGPVADRRDGTERAFVMPTHCPSCGTAL
APEKETDVDIRCPNARYCPAQLRERLFALAERSGLDIEALGAKSAAALLESVITNESELF
DVTADRLLKAPFFVNKDGSLSSTAQQLLVNLEEVKQRPLARVLIALSIRHVGPTAAQALA
NSLGSMEAIANATTEELVAVEGVGPTIARAVHDWFEVDWHREWVDRWAAAGVRMVEERAD
TGPRSLEGITVVVTGSLDKYSRDQAAEAVTSRGGKVSGSVSKKTHFVVVGESPGSKADKA
ASLKVPILDESGFDLLLSAGPEAARAAAQPTEPPA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgatgccgagcccaccctcgaagcgcgtgagcggcacgccgagctctcc
cgcgagctggacgagcatcagtatcgctactacatcctccagtcgccgagcgtcgacgac
tcggtctacgaccggttcatgcgtgagctggaggccatcgaggcggagtatccggcactg
atcacgcccgactcgcccagccagcgggtcggcggcaccttctcgaccgacttcgccgcg
gtcacccacgccgagcggatgctcagcctcgacaacgcgctcaacgacgccgagctggac
gcgtgggtcgagcgcatcgagcgcgacgccggccagcagccgagatacctgtgcgagctg
aagatcgacgggctggcggtcaacctgacgtacaagaagggtcgcctggtccgggccgcg
acccgcggcgacgggcgcaccggcgaggacatcacgctcaacgtccgcaccatccgcgac
gtcccggagcggctcaccggcgacgatcttcccgcactgctcgaggtgcgcggcgaggtg
ttcttcacactggccggcttcgaggaggtcaacgcggcacaggtcgcggcgggggaaaac
ccgttcgccaacccgcgcaacgcggccagcggcagcctgcgccagaaggacccgcgcatc
accgcgtcccgcccgatgcgcatgctcgttcacgggttcggtgcccgcgaggggttcaac
ccggtcagccagtccgaggcctatgagctgatgcacgcctggggcctgccgacctccgag
cggtggaaggtcttcgacgatctcaagggcgtccggtcctacatcgccgactacggcgac
aagcggcacaagatcgagcatgagatcgacggtgtggtcgtgaaggtcgaccagatgtcg
atccagcgccggctcggctcgaccagcaaggcgccgcggtgggcgatcgcgttcaaatat
ccgcccgaggaggcgatgaccaagctcctcgacatcgaggtcaacgtcggccggacgggt
cgcgtcacaccgttcgcgatcatgcagccggtgttcgtcggcggtgtcacggtcgcgcag
gccaccctgcacaacgcgcaggaggtcgtgcgcaagggcgtgctcatcggtgacacggtg
gttatccgccgcgccggggaggtcatccccgaggtgctgggtccggtcgccgaccggcgt
gacggcaccgagcgcgccttcgtgatgccgacccactgcccgtcctgcgggacggcactg
gcccccgagaaggagaccgacgtagacattcgctgccccaacgcccgctactgtccggcc
cagctccgtgagcgcctgttcgccctcgccgaacgcagcggcctcgacatcgaggcgctc
ggcgcgaagtcggccgcggccctgctcgagtcggtgatcaccaacgagagcgagctcttc
gacgtcaccgcagaccggctgctcaaggcgccgttcttcgtgaacaaggacggctccctc
agcagcaccgcccagcagctcctggtcaacctcgaggaggtcaagcagcgcccgctcgcg
cgcgtgctgatcgctctgtcgatccgccacgtcggcccgacggcggcgcaggcgctggcc
aactcactcggctcgatggaggcgatcgccaacgccacgaccgaggagctggtggccgtc
gagggcgtgggaccgacgatcgccagggccgtccacgactggttcgaggtcgactggcac
cgggagtgggtcgaccgctgggccgccgcgggcgtccgcatggtcgaggagcgcgcggac
accggcccgcgttccctggagggcatcacggtcgtcgtgaccggctccctggacaagtat
tcgcgcgaccaggccgccgaggcggtgacctcccgcggcggcaaggtctccggctcggtc
tccaagaagacccacttcgtcgtggtcggcgagtccccgggctccaaggccgacaaggcc
gcctccctgaaggtccccatcctcgacgagtccggcttcgacctcctgctctccgccggc
ccggaagccgcccgcgcagcggcccagcccaccgagccccccgcctga
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