Dactylosporangium roseum: Drose_22385
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Entry
Drose_22385 CDS
T08480
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
dros
Dactylosporangium roseum
Pathway
dros03030
DNA replication
dros03410
Base excision repair
dros03420
Nucleotide excision repair
dros03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dros00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Drose_22385 (ligA)
03410 Base excision repair
Drose_22385 (ligA)
03420 Nucleotide excision repair
Drose_22385 (ligA)
03430 Mismatch repair
Drose_22385 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dros03032
]
Drose_22385 (ligA)
03400 DNA repair and recombination proteins [BR:
dros03400
]
Drose_22385 (ligA)
Enzymes [BR:
dros01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Drose_22385 (ligA)
DNA replication proteins [BR:
dros03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Drose_22385 (ligA)
DNA repair and recombination proteins [BR:
dros03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Drose_22385 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Drose_22385 (ligA)
MMR (mismatch excision repair)
DNA ligase
Drose_22385 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Drose_22385 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
HHH_5
BRCT
HHH
PTCB-BRCT
UPF0758_N
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
UWZ34006
UniProt:
A0ABY5YXA0
LinkDB
All DBs
Position
complement(4814809..4816890)
Genome browser
AA seq
693 aa
AA seq
DB search
MTEELVVDARVAEPFPSPEEYRAAVEDVRSAAALYYGGTELAMDDAVYDALMARVAATEA
ATPSWKAEESPTEVVAAGGGVVGDVVHSTPMLSLDNVFDEETLRRWAARLDRLLGRPAVG
YTVEPKIDGLAIAARYVDGSLVQVATRGDGRAGEDVTGQARRAAGLPERLTEPVTLEIRG
EVFMTDADFEVANGMRTGAGEPAFAHPRSAAAGTLRAQDRTYDAPLSFLAYAVHGLGDGA
HSAEMAAVERLGIATTAGSPAGMPVCATVDEVLEAVHALNAKRGVLGFGIDGAVIKADQP
ADRAAAGFSSRAPRWGIAYKFPADTRTTKLLRIEVQIGRTGVITPVAVLEPVQISGVIVT
SATLHNFDDLVRRNVWPGDTVFVRRAGDVIPEVTGAKLDERPADAAPFEPPVRCPRCDGE
IDRSQKRWRCTRGRACGAHESLAYYAARHSMDIEGLGGKLIDMLVAAGLVTDPADLYDLD
VPTVTKLERMGEVSATKLVTAIQASKEQPLARVLTGLGVRMTGRSMSRRLARHFGTMRAL
LDASVEDLQQVEGVGPERAVMIAAELVEIAPVIAKLVERGVNMTEPDIAGPAGPAGPGAP
PTDGADRPDLPLRKPDGTPMTVVVTGAVPGLTRDEGNEAVERLGGKSSGSVSKRTDLVVV
GAGAGSKAEKAEQLGIRIMPADEFAALLTAHTP
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagagctggtcgtggacgcgcgggtggccgagccgttcccctccccggaggag
tatcgtgcggcggtcgaggacgtccggtcggcggccgcgctctactacggcggcaccgag
ctggcgatggacgacgccgtctatgacgcgctgatggcccgcgtcgccgccaccgaggcc
gccaccccctcgtggaaggcggaggagtcgccgaccgaggtcgtggccgcgggcggcggt
gtcgtcggcgacgtggtgcacagcacgccgatgctcagcctggacaacgtcttcgacgag
gagacactgcgccggtgggcggcccgcctcgaccggctcctcggccgaccggccgtcggg
tataccgtcgagccgaagatcgacgggctggcgatcgccgcgcgatacgtcgacggcagc
ctggtgcaggtcgccacgcgcggtgacggacgcgccggtgaggacgtcaccggccaggcg
cggcgcgccgccggcctgccggagcggctgaccgagccggtgaccctggagatccgcggc
gaggtgttcatgaccgacgccgacttcgaggtggccaacggcatgcgcaccggcgccggc
gagccggcgttcgcgcacccgcgcagcgccgccgccggcacgctccgggcgcaggaccgc
acctatgacgcgccgctgtccttcctcgcctatgccgtgcacggcctcggcgacggcgcg
cactccgccgagatggccgccgtcgagcggctcggcatcgccaccaccgcgggttcgccg
gccgggatgccggtctgcgccaccgtcgacgaggtgctggaggcggtgcacgcgctcaac
gccaagcggggcgttctcgggttcggcatcgacggcgcggtcatcaaggccgaccagccc
gccgaccgggccgccgccggcttctccagccgggcgccgcggtggggcatcgcctacaag
ttcccggccgacacccgcaccaccaagctgctgcgcatcgaggtgcagatcgggcggacc
ggcgtcatcacgccggtcgcggtgctcgagccggtgcagatcagcggcgtcatcgtcacg
tcggccacgctgcacaacttcgacgacctcgtccggcgcaacgtgtggccgggcgacacg
gtgttcgtccgccgggccggtgacgtcatcccggaggtcaccggggccaagctcgacgag
cggccggccgacgcggcgccgttcgagccgccggtccggtgcccccgctgcgacggggag
atcgaccgcagtcagaagcgctggcggtgcacccgtggccgggcctgcggcgcgcacgag
tcactggcgtactatgccgcgcggcactccatggacatcgagggtctcggcggcaagctc
atcgacatgctcgtggccgccgggctggtgaccgaccccgccgacctctacgacctcgac
gtgccgacggtcaccaagctggagcggatgggcgaggtgtcggcgaccaagctcgtcacc
gcgatccaggcgtcgaaggagcagccgctggcccgcgtgctgaccggcctcggggtgcgc
atgaccggccggtcgatgtcgcgccggctggcccggcacttcggcaccatgcgtgcgctg
ctcgacgcctcggtcgaagacctccagcaggtcgagggcgtcggccccgagcgcgccgtg
atgatcgccgccgagctggtcgagatcgcgcccgtcatcgccaagctggtcgagcgcggc
gtcaacatgaccgagcccgacatcgccggcccggccggcccggccggccccggggcgccg
cccaccgacggcgcggaccgccccgacctgccgctgcgcaagcccgacggcaccccgatg
acggtcgtggtcaccggcgcggtgcccggcctgacccgcgacgagggcaacgaggccgtc
gagcgcctgggcggcaagtcctccggctcggtgtcaaagcgcaccgacctcgtcgtggtg
ggcgccggcgccggctccaaggccgaaaaagccgaacaactgggcatccgcatcatgccg
gccgacgagttcgccgccctgctgacagcccacaccccctga
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