Devosia rhodophyticola: PSQ90_08060
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Entry
PSQ90_08060 CDS
T09920
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
drp
Devosia rhodophyticola
Pathway
drp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
drp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSQ90_08060 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
drp03400
]
PSQ90_08060 (nth)
Enzymes [BR:
drp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PSQ90_08060 (nth)
DNA repair and recombination proteins [BR:
drp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PSQ90_08060 (nth)
Prokaryotic type
PSQ90_08060 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
DNA_pol3_finger
HHH_8
Motif
Other DBs
NCBI-ProteinID:
WDR07361
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All DBs
Position
1647364..1648059
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AA seq
231 aa
AA seq
DB search
MARLKKVNGLPKADVEAIFARFAQMDPEPKGELDYINAFTLLVAVVLSAQATDIGVNKAT
KTLFELAPTPETMVALGPEKIEDLVRTIGLYRTKARNVFALSQLLIEKHKSEVPDERAAL
EALPGVGRKTANVVLNIFFKQPTIAVDTHLFRVSNRTGLAPGATPLAVEQKLVNTIPEPY
LLHAHHWLILHGRYICKARKPECYRCIIAQWCRFEPKTPQPVAKSGKATSN
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcctaaaaaaagtgaacggtttgcccaaagccgatgtcgaagcgatcttcgcc
cgcttcgcgcagatggatcccgagcccaagggcgagctggactatatcaacgctttcaca
ttgctggtggcagtggttctatcggcgcaggcaaccgatattggggtcaacaaggccacc
aaaaccctgttcgaactggctccgacgccggaaaccatggtggcgctcgggcctgaaaaa
attgaggatctggtgcgcactatcgggctttaccgcaccaaggcgcgcaatgtttttgcg
ctgagccaattgctgatcgaaaagcacaaatcagaggttcccgacgaacgcgccgccctt
gaagccctgccaggggtcgggcgaaagaccgcgaatgtggtgctcaatatctttttcaag
cagcccacgattgccgttgatacccatctgttccgcgtaagcaaccggaccggtctggct
ccgggtgcaacaccgctagcggtcgaacaaaagttggtcaacaccatccccgagccttat
ctgctgcacgctcatcactggctgatcctgcatgggcgctatatctgcaaggcgcgcaag
ccggaatgctaccggtgcatcatcgcgcaatggtgccggttcgaacccaaaacaccgcag
ccggtggcgaagtcgggcaaggctacgtcaaactga
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