Devosia rhodophyticola: PSQ90_13675
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Entry
PSQ90_13675 CDS
T09920
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
drp
Devosia rhodophyticola
Pathway
drp00300
Lysine biosynthesis
drp00550
Peptidoglycan biosynthesis
drp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
drp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PSQ90_13675
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PSQ90_13675
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
drp01011
]
PSQ90_13675
Enzymes [BR:
drp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
PSQ90_13675
Peptidoglycan biosynthesis and degradation proteins [BR:
drp01011
]
Precursor biosynthesis
Amino acid ligase
PSQ90_13675
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Methyltrn_RNA_2
Gram_pos_anchor
Motif
Other DBs
NCBI-ProteinID:
WDR05325
LinkDB
All DBs
Position
2790186..2791631
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AA seq
481 aa
AA seq
DB search
MSFSVTQLLEGSGALPSSGVGAIFGVNADSRRIEPGDVFFALPGANAHGNAFVAEAIARG
ALVIVTDQEPESDPGVPVIVVDDVRAAYARAASRIFAPQPAIAVAVTGTNGKTSVASFVR
QIWQAAGLAASSIGTLGVETSWGLRGGSLTTPDSRTLHQNLRALKAQGIDHVAIEASSHG
LEQRRLDGVHFEAVAFTNLTRDHLDYHADMDGYRSAKLRLFTDLLVEGGPAIVNVDDPEH
EAFMFAALGHNATLLTVGREGAYIEIVSIEREGYGQRVEVKHIGETISFHLPLTGEFQVS
NALIAAALAMATGVDRTDAFAALSGLKGAKGRLELVAAKQSSAVFVDYAHTPDALQTALE
ALRPYATGRLIVAFGCGGDRDKGKRSLMGAIAAKGADLVIVTDDNPRTEEAASIRAGIMV
AVPGAREIGDRRSAILEGIRLLGEGDVLLVAGKGHEDYQIIGVNKTHFSDHEVILAALGT
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
gtgtctttcagcgtcactcagttactcgaaggttcaggcgccctacccagttcgggtgtg
ggcgccatttttggcgtcaatgccgatagccgacggatcgagcctggggatgtgtttttt
gcgctgccgggcgccaatgcgcatggcaatgcgtttgtggccgaagccattgcgcgtggt
gcgctggttattgtcacggaccaagaaccggaaagcgatcccggggtgccggtgatcgtg
gtggacgatgttcgggcagcttatgcacgcgcggcgtcgcgcatttttgcgccgcaacca
gccattgcagtcgcggtcactggcaccaacggcaagacctcggtcgcctcgttcgtgcgc
cagatttggcaggcggcagggttggcggcgagcagcatcggcacacttggagtggaaacg
tcgtggggcctgcgtggtggtagtttgacgacacccgactcacggacgctgcatcaaaat
ttacgcgccttgaaagcgcagggcatcgaccatgtcgccattgaagcgtcgagccacggg
ctggaacagcgccgtcttgatggtgttcatttcgaagccgtcgccttcacaaatcttacc
cgcgatcacctcgactatcatgcagatatggacggctatcggagcgcaaaactgcgcctg
tttaccgaccttttggtcgaaggcggtccggctatcgtcaatgtcgatgatccagaacat
gaagccttcatgtttgctgcgcttggccataatgcgaccctgctcaccgttgggcgggaa
ggggcctatatcgaaattgtctcgattgaacgcgagggttatggccagcgcgtcgaggtc
aagcacattggcgagacaatcagttttcatctaccattgaccggcgaatttcaggtcagc
aacgcgctgattgcggccgcgttagcgatggccacaggggttgatcgaactgacgcattt
gcggcactttcgggtctgaagggtgccaagggacggttggagttggtcgctgcaaagcaa
agcagcgcagtttttgtcgattatgcccatacgcccgatgcattgcagacggcgcttgag
gcattacgcccctatgccaccggtcggttgatcgtggcttttggatgtggcggcgaccga
gacaagggaaaacggtccttgatgggtgcaattgcggcaaagggggcggatctggttatc
gttacggacgataatccacgcactgaggaggccgcatcaattcgcgccgggatcatggtt
gcggttcccggtgcacgggagatcggcgaccgccggtcggccattttggaaggtatcagg
ctactgggtgagggcgacgtattgctggttgccggaaaaggtcatgaagactatcaaatc
attggcgtcaacaagacgcatttttcggatcatgaggtgatcctcgcggcactcggcacg
tcctga
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