Devosia rhodophyticola: PSQ90_14750
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Entry
PSQ90_14750 CDS
T09920
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
drp
Devosia rhodophyticola
Pathway
drp01501
beta-Lactam resistance
drp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
drp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PSQ90_14750
01503 Cationic antimicrobial peptide (CAMP) resistance
PSQ90_14750
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
drp02000
]
PSQ90_14750
01504 Antimicrobial resistance genes [BR:
drp01504
]
PSQ90_14750
Transporters [BR:
drp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PSQ90_14750
Antimicrobial resistance genes [BR:
drp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PSQ90_14750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WDR05519
LinkDB
All DBs
Position
complement(2993914..2997048)
Genome browser
AA seq
1044 aa
AA seq
DB search
MFLTKISVNNPVFATMVMVALMVFGIYSYLRLPIEQLPDIDLPVVAVVVSYPGASPEAVE
NDIVQPVEDAVNTINGIDSVQSTSAAGQALIIILFDMEVNSSDAAQEVRDRIATVAPSFP
ENANDPQILRFDPGELPVMSLAISSDSLSQRDLTALAEDVVVRQLSIISGVGRATIVGGV
PRQLNILVDPDKLNAFNVGVGQVLAALQQDNQNLPAGSVEEGLLVQPIQVEGRIVRSQDF
LDIIIARQGGQPVRLGDVATIENGQADVGSLAVLNGERAIAIDIVKTQGANTVEVAEQIR
HAIELLRSDELPEGVKLDVVTDNAVPVEQSFHAVQNMLIEGALLAIIIVFLFLNSWRSTV
ITGLTLPISIIGTMTVLFFLGFTLNMMTLMALSLAVGLLIDDAIVVRENIMRHLHMGKSH
RQAALDGTNEIGLAVLATTLSIVAVFLPVAFMEGILGRFFLQFGVTVSVAVLISLFVAFT
LDPMMSSVWYDPAAEKNPKRGPIGKAIAQFDRFFEWISGGYRNVLRWSLSHRKSTLGIAV
AALMGSFALFPLVGVEFTPAVDNSEFQVSLETPVGSSLDYTAIKVRQVNDTLMQFPEIKG
TYATVNGAGGSGTNSSSITVSMVPPDQRESTPQSIVPAVREALKQIPGANFNIGAAGGLG
GGVTAPIQISVYGDNFEVLDRLAGELGRKLEKIDGVIDVESSLDSAQPVLGVQVDADAAS
DLGVSMQQIASTLRPLLGGQEVTDWTTAQGDNFSVVVRLPEWERDDANALGALPITQSGA
TGSTQIIRLDQVATIVPSTSPGEIQRLDLARQVTVSANLSGTDLGKVTPALRDAIDSLQM
PTGYRATTGGDVEQLNETASAAGSALLLAVVFIYLVLASQFGSFIQPIAIMVSLPLALVG
VLVGLLVGGSTLNMFSIIGFIMLMGLVVKNAILLVDNANQHHRAGMNLYDALVEAGITRF
RPIIMTTLAMIFGMLPLALSIHEGSGQNAPMAHAVIGGLISSTLLTLVVVPVVLTYLDGF
SRFAARLLPKAPHDDPETDLQPAE
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgttcttgaccaaaatcagcgtcaataatcccgtctttgccaccatggtcatggtcgcc
ctgatggtctttggcatttactcatacttgcgcctaccaatcgagcaattgccagacatc
gacctgccggtggttgccgtggtcgtcagctatccgggcgcctcccccgaggcggttgaa
aacgatattgttcaaccggtcgaagatgcggtcaataccatcaacggcatcgactctgtc
cagtccacatcggcagccggtcaggccctgataatcatcctgttcgacatggaagtgaat
tcttccgacgctgctcaagaggtccgtgaccgtatagccacggtggcgccatcattcccc
gaaaacgccaatgacccgcaaatcttgcggtttgatccgggcgaattgcctgtaatgtcg
ttggccatcagctcagactcgctttctcaacgggatttgacggcgttggccgaagatgtc
gtcgtgcgccagctctcgattatttccggcgtcggccgggcaactatcgtgggtggcgtg
ccccgccagctcaacattctggtcgatccggacaagctgaacgctttcaatgtcggcgtc
ggtcaggtactcgcagccctgcagcaggacaaccaaaacctgcccgcaggatcagtcgag
gaagggttgctcgtccagcccatccaggtcgaagggcgcattgtgcgttcccaggatttt
ctggacatcatcatcgctcgtcagggtggacagcccgtgcggttgggcgatgtagcgacc
atcgaaaatggtcaggcggacgtcggtagccttgcagtgctaaacggcgaacgcgctatc
gccatcgacatcgtcaagacccagggggcaaacaccgtcgaggttgccgagcagatccgt
cacgccatcgaactgctgcgatccgacgaattgccagaaggcgtcaaattggacgtggta
accgataatgccgtgccggtcgaacagtcattccatgccgttcagaacatgctgatcgaa
ggcgcccttcttgccatcatcatcgtgtttttgttcctcaattcatggcgctcgacggtc
attacgggcctgacgctgcccatctctattatcggcaccatgactgtgctgttcttcctc
ggcttcaccctcaacatgatgacgctgatggcgctctcgttggctgtaggtcttttgatc
gacgatgccatcgttgttcgtgaaaatatcatgcgccacctccacatgggtaaaagccat
cgacaggcagcgctggatggtaccaatgagatcgggctggccgtgttggccacaacgctt
tccattgtcgccgtgttcctccccgttgcttttatggagggcattcttgggcgtttcttc
cttcaattcggcgtcacggtttcagttgccgtgctgatttcgctttttgtcgccttcacg
ctcgacccgatgatgagcagcgtctggtacgatccagccgccgagaaaaaccccaaacgc
ggccccatcggcaaggccattgcccaatttgatcgcttctttgaatggatttcaggaggc
tatcgcaatgtgctgcgctggagcctttcccatcgcaaatcaacgctcggaatcgccgtt
gcggcactgatgggaagttttgcgctgttcccactggtgggtgtggaattcacaccagcc
gtcgacaacagcgagttccaggtctccctggaaaccccggtgggttcgtcgcttgactat
acggcaatcaaggtccgtcaggtcaatgacacactcatgcagttcccggagatcaaaggc
acctacgcaacggtcaacggcgccggtggctccggaaccaacagctcatccattaccgtg
tctatggtccctccggatcagcgtgaaagcacgcctcagtccatcgtccctgccgtacgc
gaggccctcaagcaaattccgggtgcgaatttcaacatcggcgcggccggtggtttgggt
ggcggtgtgacggcaccaatccagatcagcgtctatggtgacaacttcgaggtgctcgac
cgtctggcgggcgagttgggtcgcaagttggaaaaaatcgacggcgtcatcgacgtcgag
tccagccttgattccgcccaacccgtgctgggcgtacaggtggatgcagacgcagccagc
gatcttggcgtaagcatgcagcagattgcttcgaccctgcgcccattgctaggcgggcag
gaagttaccgactggacaacagcacagggcgacaatttctccgtagtcgtacgactgccc
gaatgggagcgcgacgacgccaatgctttgggcgctctgccaattacacaaagtggcgct
accggtagcacccagatcatccggctcgaccaggtcgcaaccatcgtgccatcgaccagt
cccggggaaattcagcgtctcgacctggcgcgtcaggtgaccgtatcagccaacctgtcc
gggacagatctaggcaaggtcacccctgccctgcgcgacgctattgatagtcttcagatg
ccaacaggatatcgggcaaccaccggtggtgacgtcgaacagctcaacgaaacggccagc
gccgctgggtcagccctgttgttggcggtggtgttcatctatctggttctggcatcacag
tttggcagtttcattcagccaattgccatcatggtgtcgctccccttggcgcttgtaggc
gtgttggtgggactgttggttggcggcagtacgctaaacatgttctccattatcggcttc
atcatgctgatggggctggtcgtcaagaacgctattctgttggttgataacgcaaatcag
catcaccgtgctggtatgaatctctacgacgcgttggtcgaagccggtatcacccggttc
cgcccaatcatcatgactacgcttgccatgatcttcggcatgctgccactggctttgagc
attcacgagggaagtggccagaacgcgccaatggcccatgcggtgattggcggcttgatc
agctccacactgttgacgctggtggtcgtacccgtggtcctgacctatctcgatggcttt
agccgcttcgcggcccgcctcctgcccaaggcgccgcacgacgatcccgagacagatctg
cagccagcagaatga
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