Devosia rhodophyticola: PSQ90_16460
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Entry
PSQ90_16460 CDS
T09920
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
drp
Devosia rhodophyticola
Pathway
drp00270
Cysteine and methionine metabolism
drp00450
Selenocompound metabolism
drp00670
One carbon pool by folate
drp01100
Metabolic pathways
drp01110
Biosynthesis of secondary metabolites
drp01230
Biosynthesis of amino acids
drp04980
Cobalamin transport and metabolism
drp04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
drp00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
PSQ90_16460 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
PSQ90_16460 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PSQ90_16460 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PSQ90_16460 (metH)
04980 Cobalamin transport and metabolism
PSQ90_16460 (metH)
Enzymes [BR:
drp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
PSQ90_16460 (metH)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
CdhD
Motif
Other DBs
NCBI-ProteinID:
WDR05814
LinkDB
All DBs
Position
3361008..3364787
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AA seq
1259 aa
AA seq
DB search
MSSPRTNEATSLSLPDGDEVRAALIAAARERILVLDGAMGTMIQRLGYEEEDFRGERFAD
WKQPVRGNNDLLILTQAQAIEDIQYEYAKAGADILETNTFSCTSVAQADYGMEELIYELN
FEGARVARRAAERATLEDGKRRFIAGALGPTTKTSSMSTDVNSPGHRSITFDQLVEAYAE
AINGLIDGGSDMLLFETITDTLNTKAGIFAAERIFTERGSRLPIMISGTITDLSGRTLSG
QTPTAFWHSLRHANPVTFGLNCALGANAMRAHLAELSEVADTLICAYPNAGLPNEFGGYD
ESPEFMAEQIEGFARDGYVNIVGGCCGSTPDHIAAIAAAVSKHKPRDIPEVPRLMRLAGL
EPFTLTKDIPFVNVGERTNVTGSARFRKLIKNGDLNAALDVARDQVANGAQIIDINMDEG
LIDSKQVMIDYLNLLAAEPDIARVPLMIDSSKWEVIEAGLKCVQGKALVNSISMKEGEAQ
FLEQARLVRAYGAAVVVMAFDEDGQADTLERKVQICSRAYKLLTEEVGFPPEDIIFDPNV
FAIATGIEEHNGYGVAFIEAIKQITENLPHVHISGGISNLSFSFRGNEPVREAMHAVFLY
YAIQNGMDMGIVNAGQLAVYDTIDPELRDACEDVILNRRDDGTDRLLELAERYRGTAGKE
AAAKDLRWREGTVEERISYSLVNGITEFIDADTEEARQKATRPLHVIEGPLMAGMSVVGD
LFGSGKMFLPQVVKSARVMKQAVALLLPYMEAEKNADGNATGRQSAGKILMATVKGDVHD
IGKNIVGVVLACNNYEIIDLGVMVPVAKILQTARDENVDAIGLSGLITPSLDEMAHVAAE
MEREGFDIPLLIGGATTSRVHTAVKIHPKYQRGQAVHVNDASRAVNVVSSLLQPDTRASY
IADIQAEYAKSAAAHARAEAAKTRLPLSQAREAAFKADWVNYTPPKPSFFGTRAFDDNDF
SLETLVKYFDWTPFFQTWELKGRFPAILDDEKQGKAARQLYDDAQAMLKRIVDEKWYRPR
GVIGFWPANAVGDDIRLFTDETRSNERATMFTLRQQLSKRGGKPNMALADFVAPLESGKA
DYVGGFAVTAGIEEVAIAQKFEQANDDYSAILAKALADRFAEAFAELMHERVRREYWGYA
ADEKLTPLELVGESYQGIRPAPGYPAQPDHTEKTTLFKLLDAEKQAGVKLTESFAMWPGS
SVSGIYLSHPDSFYFGVAKVEYDQVEDYARRKGMEIADVERWLGPVLNYIPGASVAAAE
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgagctctccccggacgaacgaagctaccagcctttctcttccagatggcgatgaggtg
cgtgcggcccttattgcggcggcgcgggaacgtattctggtgttggacggcgccatgggc
accatgatccagcggctgggttatgaagaagaggattttcgaggtgagcgatttgctgat
tggaaacaaccagttcgcggcaataatgacctattgatcctcactcaggcgcaggcgatt
gaggatattcagtatgagtatgccaaggccggggctgacattctggagaccaatacgttc
tcgtgtacctcggttgcccaagccgattacggcatggaagaattgatctatgagctgaat
tttgagggtgcacgcgtggcacgccgtgcggcagagcgtgcgacactggaagacggcaaa
aggcgtttcattgcgggggccttgggaccaacgaccaagacatcgtcgatgtcaacagat
gttaacagtccgggtcaccgatccatcacgtttgaccaacttgttgaggcctatgcagag
gcgatcaatggattgatcgatggcggctccgacatgctgctgtttgaaacgatcaccgat
acgctcaataccaaagcggggatatttgcagccgaacgaatttttaccgaacgcggatcg
cgtctgccgatcatgatttcgggaacgattaccgatttgtcgggacgcaccctgtcggga
cagacgccgacagcattctggcattcgctgcgccacgccaatccggtaactttcgggtta
aattgtgccctgggagccaacgcgatgcgggcccatctggcggaattgagcgaagttgcc
gatacgctaatctgtgcctatcccaatgccgggctacccaatgaatttggcggctatgac
gagagccctgagttcatggccgagcaaatcgagggcttcgcacgcgatggctatgtcaac
attgttggtggctgttgcggttcgacaccggatcacatagcggccattgcggcggcggtg
agcaaacacaagccgcgtgatatcccggaagtgccgcgactaatgcgtctggcggggctc
gagccattcacgctgaccaaggacattccgttcgtcaatgtgggcgagcgcaccaacgtt
accgggtcggcacggttccgcaaactgatcaagaatggcgatttgaacgcggcgctcgac
gtggcgcgtgatcaggtggccaatggcgcccagatcatcgatatcaacatggatgaaggc
ctgatcgacagcaagcaggtgatgattgactatctcaatctgctcgccgccgaacccgat
attgcgcgcgtgccgctgatgatcgacagctccaagtgggaggtgatcgaggccgggctg
aaatgcgtgcagggaaaggcgctggtcaattcgatttccatgaaggaaggcgaagcgcag
ttccttgagcaagcgcgccttgtgcgggcttacggtgccgccgtcgtcgtcatggcgttt
gatgaagatgggcaagccgatacgctggagcgcaaggtccagatctgctcgcgggcctac
aagctattgaccgaggaggtcggttttccgcctgaagacattatctttgaccccaatgtg
tttgccattgcaaccggcattgaagagcacaatggttatggtgtggcctttatcgaggcg
atcaagcaaatcaccgagaatctgcctcacgtccatatctcgggaggcatttccaacctg
tcattctcgttccggggcaacgagccggtacgcgaagcgatgcacgctgtgttcctctat
tatgccattcagaatggcatggacatgggcatcgtcaatgccgggcagttggcggtctat
gacacgatcgatcccgaacttcgggatgcctgtgaagacgtaattctcaaccgacgcgat
gatggtactgatcgactgctcgaactggccgagcgctatcggggcacggcaggcaaggaa
gcggctgccaaagatttgcgctggcgcgaaggcacggttgaagaacgcatcagctactcg
ctggtcaacggcataaccgaatttatcgatgccgataccgaggaagcgcggcagaaggcc
actcgaccgctgcatgtgatcgaaggcccgctgatggcgggcatgagtgtggtgggtgac
ctgttcggttcgggcaagatgttcctgccccaggtggtcaaatccgcgcgcgtgatgaaa
caggccgtagcgctgttgctgccctatatggaagccgaaaagaacgctgatggaaatgcc
accgggcggcagagcgcgggcaagatcctgatggcgacagtcaagggcgatgtgcacgat
attggcaagaatatcgttggcgtcgttttggcctgcaacaattatgagatcatcgacctc
ggcgtcatggtgccggttgcaaaaattcttcagactgcgcgcgacgagaatgtcgacgcg
atcgggctgtctggcctgattacaccgtcgctggatgagatggcgcacgttgcggcggaa
atggaacgcgagggatttgatattcccctgctgattggtggcgcgacgaccagccgcgtg
catacggcagtcaaaattcatccgaagtatcaacgcgggcaagctgttcacgtaaacgat
gccagccgcgccgtgaatgttgtttcgagtttgctgcagccagatacaagggccagctat
attgctgacattcaggcggaatatgcaaaatccgccgctgcgcatgcacgggctgaggcc
gccaagacacgtttgcccttgagccaggcgcgggaagctgcattcaaggcggattgggtc
aattatacgccgccaaaacccagttttttcggcacgcgtgccttcgatgacaatgacttc
agtttggaaacgttggttaagtattttgactggacgccttttttccagacttgggagctc
aaagggcgttttccggcaattcttgatgacgaaaagcagggcaaggcggcgcgacagctt
tatgacgatgcgcaggctatgctcaagcggatcgtagacgaaaaatggtacaggccacgc
ggcgtcattggcttttggccggccaatgctgtcggtgatgacatccgactgtttaccgac
gaaacgcgctcaaacgagcgcgccacaatgtttacgcttcgccagcaattgtccaaacgc
ggcggcaagcccaatatggcgttggccgattttgtggcgccgctggagagtggcaaggcc
gactatgttggtggttttgccgttactgccgggatcgaagaagtggccattgcgcaaaaa
tttgagcaggcaaatgacgactattctgccattctggccaaggcactagctgaccgattt
gcggaggcatttgctgagttgatgcatgaacgcgtgcggcgtgaatattggggttatgct
gcggatgaaaaacttaccccgctggaattggttggtgagagctaccagggtattcgtccg
gcgccgggctatccggctcaacctgaccacactgaaaagacaaccctgtttaaacttctg
gatgctgagaaacaggcaggcgtcaaactgactgaaagttttgccatgtggccgggatct
tcggtgtcggggatttacctttcgcacccggattccttctattttggtgtcgccaaggtc
gaatatgatcaagtcgaagattatgcgcggcgcaagggcatggaaattgctgacgttgaa
cgctggcttggaccggtgctcaactacataccgggggccagcgtggcggcggctgaatga
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