KEGG   PATHWAY: dsa02010
Entry
dsa02010                    Pathway                                
Name
ABC transporters - Maridesulfovibrio salexigens
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
dsa02010  ABC transporters
dsa02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Maridesulfovibrio salexigens [GN:dsa]
Gene
Desal_0007  [KO:K02066]
Desal_0008  [KO:K02065]
Desal_0009  [KO:K02067]
Desal_0114  [KO:K10094]
Desal_0218  [KO:K07323]
Desal_0219  [KO:K02067]
Desal_0221  [KO:K02066]
Desal_0235  [KO:K01995]
Desal_0236  [KO:K01999]
Desal_0237  [KO:K01997]
Desal_0238  [KO:K01998]
Desal_0239  [KO:K01996]
Desal_0302  [KO:K02018]
Desal_0303  [KO:K02020]
Desal_0304  [KO:K02017] [EC:7.3.2.5]
Desal_0305  [KO:K02018]
Desal_0306  [KO:K02020]
Desal_0501  [KO:K17317]
Desal_0502  [KO:K17316]
Desal_0503  [KO:K17315]
Desal_0504  [KO:K10112] [EC:7.5.2.-]
Desal_0618  [KO:K01999]
Desal_0674  [KO:K02002]
Desal_0675  [KO:K02001]
Desal_0676  [KO:K02000] [EC:7.6.2.9]
Desal_0774  [KO:K02007]
Desal_0816  [KO:K02001]
Desal_0817  [KO:K02002]
Desal_0818  [KO:K02000] [EC:7.6.2.9]
Desal_0929  [KO:K07335]
Desal_0963  [KO:K10439]
Desal_0992  [KO:K09816]
Desal_0993  [KO:K09817] [EC:7.2.2.20]
Desal_0994  [KO:K09815]
Desal_1080  [KO:K09817] [EC:7.2.2.20]
Desal_1081  [KO:K09816]
Desal_1117  [KO:K01999]
Desal_1121  [KO:K01999]
Desal_1143  [KO:K05776]
Desal_1226  [KO:K02066]
Desal_1227  [KO:K02065]
Desal_1228  [KO:K02067]
Desal_1324  [KO:K11069]
Desal_1325  [KO:K11070]
Desal_1326  [KO:K11071]
Desal_1327  [KO:K11072] [EC:7.6.2.11]
Desal_1541  [KO:K02193] [EC:7.6.2.5]
Desal_1542  [KO:K02194]
Desal_1543  [KO:K02195]
Desal_1546  [KO:K01999]
Desal_1547  [KO:K01997]
Desal_1548  [KO:K01998]
Desal_1549  [KO:K01995]
Desal_1550  [KO:K01996]
Desal_1883  [KO:K10094]
Desal_1884  [KO:K16915]
Desal_1891  [KO:K07091]
Desal_1892  [KO:K11720]
Desal_1901  [KO:K11085] [EC:7.5.2.6]
Desal_2073  [KO:K11004]
Desal_2078  [KO:K12541]
Desal_2079  [KO:K12541]
Desal_2213  [KO:K12541]
Desal_2256  [KO:K06861] [EC:7.5.2.5]
Desal_2287  [KO:K10038] [EC:7.4.2.1]
Desal_2288  [KO:K10037]
Desal_2289  [KO:K10036]
Desal_2344  [KO:K10094]
Desal_2345  [KO:K16915]
Desal_2416  [KO:K15495]
Desal_2417  [KO:K15496]
Desal_2418  [KO:K15497] [EC:7.3.2.5 7.3.2.6]
Desal_2448  [KO:K23537]
Desal_2449  [KO:K23536]
Desal_2450  [KO:K23535]
Desal_2451  [KO:K07335]
Desal_2525  [KO:K09810] [EC:7.6.2.-]
Desal_2526  [KO:K09808]
Desal_2550  [KO:K10439]
Desal_2551  [KO:K10440]
Desal_2552  [KO:K10441] [EC:7.5.2.7]
Desal_2553  [KO:K06726] [EC:5.4.99.62]
Desal_2636  [KO:K01999]
Desal_2643  [KO:K02020]
Desal_2670  [KO:K15553]
Desal_2671  [KO:K15554]
Desal_2672  [KO:K15555] [EC:7.6.2.14]
Desal_2857  [KO:K12541]
Desal_2874  [KO:K06857] [EC:7.3.2.6]
Desal_2875  [KO:K05773]
Desal_2876  [KO:K05772]
Desal_2915  [KO:K09972] [EC:7.4.2.1]
Desal_2916  [KO:K09971]
Desal_2917  [KO:K09970]
Desal_2918  [KO:K09969]
Desal_2943  [KO:K01999]
Desal_2944  [KO:K01997]
Desal_2945  [KO:K01998]
Desal_2946  [KO:K01995]
Desal_2947  [KO:K01996]
Desal_3016  [KO:K07335]
Desal_3148  [KO:K01999]
Desal_3195  [KO:K01999]
Desal_3207  [KO:K02008]
Desal_3208  [KO:K02006]
Desal_3274  [KO:K07335]
Desal_3306  [KO:K11070]
Desal_3307  [KO:K11071]
Desal_3308  [KO:K11072] [EC:7.6.2.11]
Desal_3309  [KO:K11069]
Desal_3372  [KO:K02010] [EC:7.2.2.7]
Desal_3373  [KO:K02011]
Desal_3374  [KO:K02012]
Desal_3392  [KO:K02036] [EC:7.3.2.1]
Desal_3439  [KO:K09815]
Desal_3471  [KO:K02038]
Desal_3472  [KO:K02037]
Desal_3473  [KO:K02040]
Desal_3519  [KO:K16787] [EC:7.-.-.-]
Desal_3520  [KO:K16786] [EC:7.-.-.-]
Desal_3521  [KO:K16785]
Desal_3552  [KO:K02012]
Desal_3553  [KO:K02011]
Desal_3554  [KO:K02010] [EC:7.2.2.7]
Desal_3774  [KO:K09812]
Desal_3775  [KO:K09811]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   

DBGET integrated database retrieval system