Maridesulfovibrio salexigens: Desal_1836
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Entry
Desal_1836 CDS
T00969
Name
(GenBank) DNA ligase (NAD(+))
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
dsa
Maridesulfovibrio salexigens
Pathway
dsa03030
DNA replication
dsa03410
Base excision repair
dsa03420
Nucleotide excision repair
dsa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Desal_1836
03410 Base excision repair
Desal_1836
03420 Nucleotide excision repair
Desal_1836
03430 Mismatch repair
Desal_1836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dsa03032
]
Desal_1836
03400 DNA repair and recombination proteins [BR:
dsa03400
]
Desal_1836
Enzymes [BR:
dsa01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Desal_1836
DNA replication proteins [BR:
dsa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Desal_1836
DNA repair and recombination proteins [BR:
dsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Desal_1836
NER (nucleotide excision repair)
GGR (global genome repair) factors
Desal_1836
MMR (mismatch excision repair)
DNA ligase
Desal_1836
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Desal_1836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_OB
DNA_ligase_aden
BRCT
HHH_5
HHH_2
PTCB-BRCT
DNA_ligase_ZBD
Nlig-Ia
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
ACS79898
UniProt:
C6BTW8
LinkDB
All DBs
Position
2011650..2013494
Genome browser
AA seq
614 aa
AA seq
DB search
MKNKNKEIKDLVALLEKHNEAYRRGMPTISDARYDELTEQLRDLDPENPFLTNVEPENFS
EKVEVRHPRPMLSTEKAYTTEELERFVSRVEKEAKAMGIKEVTYRITPKLDGLAARDDGK
VFATRGNGEVGYEISSAFTKGVVAVGGRGQGVGEIVCSLEYFDEHLANSFEHPRNMVVGI
ITSDKVNEASKQALQDEAVRFVPYSTLPKKVVNGEELVSRVWEITDELWEAADYPLDGMV
AEVTDTALQERLGATAHHYRWQIAIKKKGESAVTEVEGIRWQVGRMGAVTPVMEVKPVSV
SGATIRNVTAHNAGMLRDQSIGIGATIRIIRSGEVIPKLEEVIKPAQEVELPAECPSCGA
ELFWQNDFLKCPDFSCPARVEQRLEYWFKTLGNADWFGKKTIAKLVKAGHNSLESVYTMA
EDDFQKLGFGPVQSTNLAEALYISKTKETDDWRFLAAFGIPDLGKADSRKLLGYFKLEDV
VNVKQEQLIELHGFGDITSHSVTEGIAAIKETILHMLEFDFNLRRTPLVSETESMESPIT
GKGIVFTGKMEQGSREDMQAMARRLGAKVQTSVTGKTDFLVCGSKVGAKKIESAKAKGVE
IMKESEFMDIVNAS
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaataaaaacaaagaaattaaagatttagttgcgcttctagagaagcataacgaa
gcatatcgccgtggtatgcctactattagcgatgctcgttatgatgagctaactgagcag
cttcgtgaccttgatcctgaaaaccctttcctgacaaatgtagagcctgagaatttcagc
gaaaaggttgaggtgcgtcatccccggcctatgctatctaccgagaaagcctacacaact
gaagagcttgagcgatttgtttcccgtgttgagaaggaagcaaaagcaatgggtatcaag
gaagttacttaccggattactcccaagcttgatggccttgccgcccgtgatgacgggaag
gtttttgctactcgcggtaacggtgaggttggctatgaaatctccagcgcttttaccaag
ggagtggttgctgtaggcggacgcgggcagggcgttggcgagattgtttgcagtcttgaa
tatttcgatgagcatttggcaaattcttttgaacacccgcgcaatatggttgttgggatt
attacctcggataaggtaaatgaagcttccaagcaggctttgcaggatgaggccgttcgc
tttgtgccttacagcactttgcctaagaaggttgttaacggcgaagaactggtcagccgt
gtctgggaaattactgacgaactttgggaagctgctgattatccgctggacggtatggtt
gcggaagttactgatactgctttgcaggaacgtcttggcgcgacagcccatcattaccgc
tggcagatagctatcaagaagaagggcgagtctgcagtaactgaggttgaaggtatccgc
tggcaggtaggacgcatgggtgcggttactccggtcatggaagttaagcctgtctctgtt
tccggtgcgaccatccgtaacgtcactgctcataatgccggaatgctacgtgatcagtcc
atcggcattggcgcgactattcgtatcattcgcagcggtgaggttattcccaagctggag
gaagttatcaagcccgcacaggaagtggaattgcctgctgaatgtccttcgtgcggtgca
gaacttttctggcagaatgactttctgaaatgtcccgatttcagctgtccggctcgtgtg
gagcagcgtttggaatactggttcaagactctcggcaatgcagattggttcggtaagaaa
accatcgccaagctggttaaggctgggcataattcccttgaatcagtttacaccatggcc
gaagatgattttcagaagcttggttttggtccagtgcagtccaccaatctggcggaagca
ctttatataagcaagaccaaggaaaccgatgactggcgttttctggctgctttcgggatt
cccgatctcggcaaggcggatagccgtaagcttttgggttatttcaagcttgaagacgtt
gtgaacgttaaacaggaacagctcatcgagttgcacggttttggcgatatcaccagtcat
tcagttacagaggggatcgctgcgattaaagaaactatcctgcatatgctggaatttgat
ttcaacctgcgtagaaccccgctggtttccgaaactgaatctatggaaagccccatcaca
ggtaaagggatcgtttttaccggaaaaatggagcagggcagccgtgaagacatgcaggcc
atggcaagacggcttggcgcaaaagttcagacttctgtaaccggcaagacagactttctc
gtctgtggtagcaaagttggagccaagaagatcgaatccgctaaagccaagggcgttgag
atcatgaaagagtcagagtttatggatatagtaaacgcgagctaa
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