Desulfovibrio subterraneus: LN040_06000
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Entry
LN040_06000 CDS
T08953
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb01501
beta-Lactam resistance
dsb01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LN040_06000
01503 Cationic antimicrobial peptide (CAMP) resistance
LN040_06000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsb03036
]
LN040_06000
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsb02000
]
LN040_06000
01504 Antimicrobial resistance genes [BR:
dsb01504
]
LN040_06000
Chromosome and associated proteins [BR:
dsb03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LN040_06000
Transporters [BR:
dsb02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LN040_06000
Antimicrobial resistance genes [BR:
dsb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LN040_06000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
VWA_3_C
PUA
Pilus_CpaD
Motif
Other DBs
NCBI-ProteinID:
WBF68650
LinkDB
All DBs
Position
complement(1313540..1314751)
Genome browser
AA seq
403 aa
AA seq
DB search
MTFISRAFQMMCLAALVLSLAGCGEEKDASAQAANGAPAVPVKAITMERADVPIFFEYVG
QTEGSRSVEVRARVQGLLLKRTYHEGSYVREGDVLFLLDPEQYRASSAQAGGELASLRAK
LEQARLEYRRIADLYARGVVSAKERDDALAAFDSGKAEVAAAEAKLQSDQLNLGYTQVRA
PISGITSQETRSEGSLVTTDSAGSLLTTITQLNPLYVNFAIPGTESMQIRRLASEGKVVI
PAAGYTVRLTLSDNSVYGETGKMNFEDRYVDPATGSIRARAEVSNADALVLPGEFVRVRL
EGAYYKDALVVPERAILFSQKGPMVYVIDDKSVASIRPVQLGQTVASGFIVEGGLQAGER
VVADGIMKVRPGAPVMILPSEDGAKAQDSGKVAEKNDNASSAN
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttatttcacgagcttttcagatgatgtgccttgctgccctcgttctttccctt
gccggttgcggtgaggaaaaggacgcaagcgcgcaggcggcaaacggtgctcctgccgtt
cccgtgaaggccattactatggaacgtgccgacgttccgatcttttttgaatatgtagga
cagacggaaggttcccgctctgttgaagtgcgcgcgcgggtgcaggggcttttgctcaag
cgcacctatcatgaaggttcttatgttcgcgagggtgacgtgctgtttctgcttgatccg
gaacagtaccgcgcatcttccgcgcaggcaggcggcgagcttgccagcctgagagccaag
cttgagcaggcgcgtcttgaataccggcgaatcgctgatctttacgcccgtggcgttgtc
agcgccaaggaacgtgacgacgcccttgccgcgttcgattccggcaaggcagaagtggct
gcggcagaagcaaagctgcagtctgatcagctgaatcttgggtacacgcaggtgcgcgcc
cccatttccggcattaccagtcaggaaacccgctccgagggcagccttgttaccaccgac
tccgcgggcagcctgctgaccaccatcacccagctgaatcccctgtatgtgaactttgcc
atacccggcactgaatccatgcagattcgccgtcttgccagcgaaggcaaggttgtgatt
cccgctgccggctacaccgtgcgtctgacgctgtccgataacagcgtgtatggcgaaacc
ggcaagatgaactttgaagacaggtacgtggaccccgcaaccggttccatccgcgcccgc
gccgaagtgtccaatgccgatgcgcttgtgctgcccggcgagtttgtccgcgtgcggctt
gaaggcgcgtattacaaggatgcgctggtagttcctgaacgcgcgattctgttcagccag
aaaggccccatggtgtatgtcatcgacgacaagagcgtggcgagcatccgtcccgtccag
ctgggacagaccgttgcaagcggctttattgttgaaggcggccttcaggccggtgagcgc
gttgttgccgacggcatcatgaaggtgcgccccggtgcgcccgtcatgattctgccttcc
gaagacggcgcaaaggctcaggactccggcaaggttgcggagaagaacgataacgcaagc
tctgcaaactaa
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