Desulfovibrio subterraneus: LN040_10005
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Entry
LN040_10005 CDS
T08953
Name
(GenBank) glycyl radical protein
KO
K23121
trans-4-hydroxy-L-proline dehydratase [EC:
4.2.1.172
]
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb00330
Arginine and proline metabolism
dsb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
LN040_10005
Enzymes [BR:
dsb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.172 trans-4-hydroxy-L-proline dehydratase
LN040_10005
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PFL-like
Gly_radical
Motif
Other DBs
NCBI-ProteinID:
WBF66065
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Position
2227789..2230149
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AA seq
786 aa
AA seq
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MNQRIWNLRKESFEAKPAISIERALLETAFYKAEYGKHPLPVLRAMFFRHLCERKTIYIG
PGELIVGERGPAPKVVPTFPELTCHSAEDLRILNSREMAHYTVAEEDIATYEREVIPYWQ
GRSMRDRVFAHVPQEWRDAYESGLFTEFMEQRAPGHTALDGMIYETGLNELKARIADRIA
RLDYLNDPHAATRADQLKAMDIACDAVILFAHRHADLAEQMARAEADPARKAELLHMASV
CRHVPANAPRTFHEALQMYWFVHLGTITELNGWDAMSPGHLDQHLAPFYETGIADGTLTR
DAAKELLSCFWIKVNNHPAPPKVGVTAKESGTYNDFTQINLGGLKRDGTDGVSEVSYLIL
EVVDDLHLLQPQPSVHVSSQTPDRFLKAAARVIRKGYGYPSVFNTDTVVMQQIRVGKSVE
DAREGGTSGCIETGSFGKEAYILTGYLNVPKVLEVALNNGVDPLTGKRVGPETGDAREFR
NFEELYTAFSRQLEYVVDLKIRVNNYIERMYAAHSPAPFLSVVIRDCIENGRDYYDGGPR
YNTNYIQCCGIGTVTDSLSAIRTHVFEQKKVSMRLLLEALAANFEGHEALRLRLWNKTPF
FGNDDDRADNIMRRVYDSLYNTIDGKPNTKGSVYHLNMLSTTCHVYFGKMLGATPNGRYA
HLPESDGTSPSHGADRNGPTAVVKSLSKMDQIKSGGTLLNQRFLPNVLAGDADLDKLVRL
IRSYFAMNGHHIQFNVVDTETLRKAQATPDEYRNLLVRVAGYSDYFVDLDADHQEEIISR
TEQELG
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcagcgaatctggaatctgcgcaaagagagctttgaggcaaagcccgccatctcc
atagaacgggcattgctcgaaaccgcattctacaaggcggaatacggcaagcacccgctg
cctgtgctgcgggccatgttcttcaggcacctgtgcgagcgcaagaccatctacatcggc
cccggcgaactcatcgtgggcgaacgcggcccagcgcccaaagttgttcccacgttccca
gagcttacctgccattccgcagaagacctgcgcattctcaacagccgcgaaatggcccac
tacacggtggccgaagaagatattgccacctatgagcgcgaggtcatcccctactggcag
gggcggtccatgcgcgaccgcgtatttgcccatgtgccgcaggaatggcgcgatgcttac
gaatccggcctgttcaccgaattcatggagcagcgtgctcccggccacaccgcgctggac
ggcatgatctacgaaaccggactcaatgaactcaaggcccgcatagcggaccgcattgcc
cgtctggactacctgaacgacccgcacgccgcaacccgcgccgaccagctgaaggccatg
gatattgcctgcgatgccgtcatcctttttgcccaccgccacgcagaccttgccgagcag
atggcgcgggcggaagcagaccccgcgcgcaaggccgagctgctgcatatggcctcggtc
tgccgacatgtacctgccaacgctccccgcactttccacgaagcactgcagatgtactgg
ttcgtgcaccttggcaccatcaccgagctgaacggctgggacgccatgagcccagggcat
ctcgaccagcacctcgcccccttctacgagacgggcattgcagacggcaccctcacccgc
gacgcggcaaaggagctgctcagctgcttctggatcaaggtgaacaaccatcccgcaccg
cccaaggtgggcgtaaccgccaaggaaagcggcacctacaacgactttacccagatcaac
ctcggcgggctcaaacgcgacggcaccgatggcgtgagcgaagtctcctacctcattctc
gaagtggtggatgacctgcacctgctgcagccgcagcccagcgtgcatgtgagcagccag
acaccggaccgcttcctcaaggcggcagccagggtcatccgcaagggttacggctacccc
agcgtgttcaacacggatactgtggtcatgcagcagatacgtgtgggaaaaagcgtggaa
gatgcccgcgaaggcggcacaagcggctgcatagaaacaggctcattcggcaaggaagct
tacatcctcaccggatacctgaacgtgccaaaagtgctggaagttgccctgaacaacggg
gtggacccgctcacaggcaagcgcgtggggccggaaaccggcgatgcccgcgaattccgt
aatttcgaggaactctacaccgccttcagccgccagcttgaatatgtggtggacctgaag
atccgcgtaaacaattacatcgagcgtatgtacgccgcgcattcgcccgcgccgttcctt
tccgtggtcatacgcgactgcatcgaaaatggccgcgactactatgacggcggcccgcgc
tacaacaccaactacattcagtgctgcggcataggcacggtcacggacagcctttccgcc
atcagaacccatgtgttcgagcagaaaaaggtgagcatgcgcctcctgctggaagccctt
gccgccaattttgaaggacacgaggccctgcgcctgcgcctgtggaacaaaacgcccttc
ttcggcaacgacgacgaccgcgcagacaacatcatgcgccgtgtgtacgattcgctctac
aacaccatagacggcaagcccaataccaagggcagcgtgtaccatctgaacatgctctcc
accacctgccatgtctatttcggcaagatgctgggagcaacgcccaacgggcgctatgcc
cacctgcccgaatccgacggcacctcgccctcgcacggggcagaccgcaacggccccaca
gcggtggtgaaatcgctgagcaagatggaccagatcaagtccggcggcaccctgctcaac
cagcggtttctgcccaacgtgctcgccggtgacgccgacctcgacaagctcgtcaggctc
atccgctcatactttgccatgaacggccatcacatccagttcaacgtggtggatacggag
accctgcgcaaggcacaggcaactccggatgaataccgcaacctgctcgtacgcgtggcg
ggctacagcgactacttcgtcgatctggatgccgaccatcaggaagagatcatcagccgc
accgagcaggagctggggtag
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