KEGG   Desulfovibrio subterraneus: LN040_10375
Entry
LN040_10375       CDS       T08953                                 
Name
(GenBank) proline dehydrogenase family protein
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
dsb  Desulfovibrio subterraneus
Pathway
dsb00250  Alanine, aspartate and glutamate metabolism
dsb00330  Arginine and proline metabolism
dsb01100  Metabolic pathways
dsb01110  Biosynthesis of secondary metabolites
Module
dsb_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:dsb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    LN040_10375
   00330 Arginine and proline metabolism
    LN040_10375
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dsb03000]
    LN040_10375
Enzymes [BR:dsb01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     LN040_10375
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     LN040_10375
Transcription factors [BR:dsb03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    LN040_10375
SSDB
Motif
Pfam: Aldedh Pro_dh PutA_N
Other DBs
NCBI-ProteinID: WBF69330
LinkDB
Position
2306441..2309467
AA seq 1008 aa
MDSGLDTRIVGRGKEFFKSISGEAPSIFNKGWWTGKVMDWAMKNEDFKVQLFRFVDVFPY
LNTSESLSRHIREYFSGEDQDVPAVLKWGAGKADGLLGKLTSGLVEKTIRTNIEGMGRQF
IVGQETKEAVKGLAKLRKDGFAFTVDLLGEATVSEEEADAYRDGYLEVLDAIAKEQDKWK
ALPGKGGDSALDWGYTPKVNVSIKPSALFSQAKAVDVEGSVQGIIDRLIPVYRKVIAMKG
FLCIDMEALKYREITLELYRRLRTMPEFRDYPHLSIVLQAYLRCTDQDLADLIKWARTER
LPIAIRLVKGAYWDMETVLAKQNGWEVPVWIHKPESDIAYERLARVILENSDICYFACAS
HNIRTISAIMEMARELNVAESRYEFQVLYGMAEPVRKGLLNVAGRVRLYCPYGDLIPGMA
YLVRRLLENTANESFLRQSFADGAELERLLENPQKTLDRELAAKPAPKPAGFHEGVEGIP
LFVNDAMIDFTIPEARAAFPAAIKDIRSRMGGKIPLYIDGKDVMTNDVIPTTNPANYSEK
LADICQAGVAEIDLALDAAERAFYVWRDVSPEDRANYLMKAAEVARKKAYELSAWQILEV
GKQWDQAFHDVGEGIDFLEYYAREMLRLGRPRRMGRAPGEHNQLFYQPKGIAAVISPWNF
PFAISIGMASAAIVTGNPVVFKPSSISARVGYNLTEVFREAGLPAGVFNFCPGRSSVMGD
YLIEHPKVSMICFTGSMEVGLRIQNKASVVKPGQMQCKRVIAEMGGKNAIIIDDDADLDE
AVLHVLYSAFGFQGQKCSACSRVIVVEPIYDRFVKRLVQAAGDVKIGPSEDPANYMGPVA
DVTLQKNVNDYIKIAEQEGTILLKRTDIPSEGAYVPMTIVGDIQPHHRIAQEEIFGPVLA
VIKARNFNEAIDIANGTRFALTGGVFSRSPEHLEKARKDFRVGNLYLNRNNTGALVERQP
FGGFKMSGVGSKTGGPDYLLQFMDPRCVTENTMRRGFAPIEEDDDWIA
NT seq 3027 nt   +upstreamnt  +downstreamnt
atggattcaggtcttgatacgcgcatcgtcgggcgcggcaaagagttcttcaaaagcatc
agcggtgaagcaccgtccatattcaacaagggttggtggaccggcaaggtaatggactgg
gccatgaagaatgaagacttcaaggttcagctcttccgcttcgtggacgtgttcccctac
cttaatacgtccgaatccctttcccgccacattcgcgaatatttctccggtgaggatcag
gacgtgcctgccgtgctcaaatggggcgcaggcaaggccgacggcctgctcggcaaactc
acctccggtcttgtcgaaaagaccatccgcaccaacatcgaaggcatgggccgccagttc
atcgtgggtcaggaaaccaaggaagcggtaaagggccttgccaaactgcgcaaggacggc
tttgcctttaccgttgacctgctgggcgaagccactgtgagcgaagaagaagcagacgcc
taccgcgacggctaccttgaagtgctcgacgccattgccaaggaacaggacaaatggaag
gcgctgcccggcaagggcggcgacagcgcgcttgactggggctacacccccaaggtgaac
gtttccatcaagccctccgccctgttctcgcaggccaaggctgtggatgtggaaggctcc
gtgcagggcatcatagaccgcctcatccccgtataccgcaaggttatcgcgatgaagggc
tttctgtgcatcgacatggaagcgctcaagtaccgcgaaatcacgctggaactgtaccgc
cgcctgcgcaccatgccggaattccgtgattacccccacctttccatcgtgctgcaggca
tacctgcgctgcaccgatcaggaccttgcggacctcatcaagtgggcgcgcaccgagcgc
ctgcccatcgccatccgtctggtaaagggtgcatactgggatatggaaaccgttcttgcc
aagcagaacggctgggaagtgccggtgtggattcacaagcctgaatccgacattgcctac
gaacgccttgcccgcgtgattcttgaaaacagcgacatctgctactttgcctgcgcctcg
cacaacatccgcaccatatccgccatcatggaaatggcccgcgaactgaacgtggccgaa
agccgctatgaattccaggtgctctacggcatggcagaacccgtgcgcaagggcctgctg
aacgttgccggccgcgtgcgcctttactgcccctacggcgaccttattcccggcatggcc
taccttgtgcgccgcctgctggaaaacacggccaacgaatccttcctgcgccagagcttt
gcagacggagcggaactggaacgcctgctggaaaacccgcagaagacgctggatcgtgag
ctggccgccaagcccgcgcccaagcctgccggtttccacgaaggggtggaaggcattccg
ctcttcgtgaacgatgccatgatcgacttcaccattccggaagcccgcgcagccttcccc
gcagccatcaaggacatccgctcccgcatgggcggcaagattccgctgtatatcgacggc
aaggacgtgatgaccaatgatgtcatccccaccaccaaccccgccaactactcggaaaag
cttgcagacatctgtcaggccggcgtagccgagattgaccttgcccttgatgctgccgaa
cgtgccttctatgtgtggcgcgacgtatcgcccgaagaccgcgccaactacctgatgaag
gcggccgaagtggctcgcaagaaggcgtatgagctttccgcatggcagattctggaagtg
ggcaagcagtgggatcaggcattccacgacgtgggcgagggtatcgacttcctcgaatac
tacgcccgcgaaatgctgcgcctcggccgcccgcgccgcatgggccgcgcccccggcgaa
cacaaccagctgttctatcagcccaagggcattgcagcggtcatttcaccgtggaacttc
cccttcgccatctccatcggcatggcctctgccgccatcgtcacgggcaaccccgtggtg
ttcaagccttcctccatcagtgcccgcgtggggtacaacctgaccgaggtcttccgcgaa
gcagggctgcccgcaggcgtgttcaacttctgccccggccgcagttccgttatgggcgac
tacctcatcgagcaccccaaggtaagcatgatctgcttcaccggctccatggaagtgggc
ctgcgcatccagaacaaggccagcgttgtcaagcccggacagatgcagtgcaagcgcgtt
atcgctgaaatgggcggcaagaacgccatcatcatcgatgacgatgccgaccttgatgaa
gcagtgttgcacgtgctctattccgccttcggcttccagggccagaagtgctccgcctgc
tcgcgcgttatcgttgtggagcccatttacgaccgcttcgtgaagcgccttgtgcaggct
gcgggcgacgtgaagatcggcccctctgaagatcctgcaaactacatgggccccgtggcc
gatgtgactctgcagaaaaatgtgaacgattacatcaagatcgccgagcaggaaggcacc
attctgctcaagcgcaccgacattccttccgaaggcgcatacgtgcccatgaccattgtg
ggtgacatacagccgcatcaccgcattgcacaggaagaaatattcggccccgtgctggcc
gtgatcaaggccaggaacttcaatgaagccatagacattgccaacggcacccgctttgcg
ctgaccggcggcgtcttctccagaagccctgagcatctggaaaaggcccgcaaggacttc
cgcgtgggtaacctgtacctgaaccgcaacaacaccggtgcgcttgtggaacgccagccc
ttcggcggcttcaagatgtccggcgtgggctccaagaccggcggccccgattacctgctg
cagttcatggacccccgctgcgtgacggaaaacaccatgcgccgtggctttgctcccatc
gaggaagacgacgactggattgcctaa

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