Desulfovibrio subterraneus: LN040_11190
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Entry
LN040_11190 CDS
T08953
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb01501
beta-Lactam resistance
dsb01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LN040_11190
01503 Cationic antimicrobial peptide (CAMP) resistance
LN040_11190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsb03036
]
LN040_11190
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsb02000
]
LN040_11190
01504 Antimicrobial resistance genes [BR:
dsb01504
]
LN040_11190
Chromosome and associated proteins [BR:
dsb03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LN040_11190
Transporters [BR:
dsb02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LN040_11190
Antimicrobial resistance genes [BR:
dsb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LN040_11190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
Biotin_lipoyl_2
HlyD_D23
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
WBF66295
LinkDB
All DBs
Position
complement(2540467..2541690)
Genome browser
AA seq
407 aa
AA seq
DB search
MNIQLWRVVIALCCIVSVAGCDASEPLASAPAEVRYSVVREEKLTLSSTLPGRVSALVMA
EVRPQVDGIIVERLFEEGADVAKGQVLYRIDPAVHKAAYAMAKASLAEAQANVAAVALLE
TRQRLLISQHAVSSQELDNTISQHGQATARVAKAQAELEAAAINLAYTEIKAPVAGRIGA
SSVTVGALVTANQPSALAVIQQTDRVYVDIAQSSTDTIRLRRAMAQGRMAHEGSATKVRL
TLEDGSPYTAMTRTKADGEQEWIQGDLLFSEISVGQSTGSILLRAVFSNPDRLLLPGMYV
KATIEEGVVGNAVLIPQGAAFANNAGGHSAYVLRRDAAGDGVFRVERRDIRLERASGNRW
VVGSGLNAGDILVVEGFQKATPGELVKGTPAQRVPAEAVARAPERKD
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
gtgaatatacaattgtggcgggtggttatagcgctgtgctgcattgtgtccgtggcgggc
tgtgacgcatcggaaccgctcgcgtccgcgcctgccgaggtgcggtactcggtggtcagg
gaagaaaaattaactctgagcagcacattgccggggcgggtttccgcgcttgtaatggcg
gaagtcaggcctcaggtggacggcatcatcgttgaacgcctctttgaagaaggcgcggat
gtggcaaaggggcaagtattgtatcgtattgaccctgctgttcataaggcggcgtacgcc
atggccaaagcatcgctggcggaggcgcaagccaatgtggcggctgttgccctgctggaa
acacggcagcggcttttgatctcccaacatgccgtcagctcacaggaactggacaatacc
atttcccagcacggacaggccactgcccgggtcgccaaggctcaagccgaactggaagcc
gccgcaattaatcttgcctacacggaaattaaagcaccggtggcaggacgcattggagct
tcgtccgtaactgtcggtgctcttgtcacggcaaaccagccatctgctctcgccgtcatc
caacagacggatcgtgtctatgtggatatagcgcagtccagcacggacactatacgcctg
cgccgggccatggctcaagggcgaatggctcacgaaggcagtgccaccaaggtgcgcctt
acccttgaagacggatctccgtacacggcgatgacccggacaaaggcggatggagaacag
gaatggatacagggggatctgttgttctcggagatatccgtcgggcaaagtacgggaagt
attctgttgcgggctgtattcagtaatccggacaggctgctgctgccgggaatgtatgta
aaggcaactatcgaagaaggggttgtaggcaatgcagtgctgattccgcaaggcgctgcg
tttgcgaacaatgccggcggacattctgcctatgtattacggcgagatgctgccggagat
ggtgtattccgggttgagcgccgcgatatccggcttgaacgcgcatcaggcaaccgctgg
gttgtcggctccggcttgaatgccggagatattctggtggtggagggatttcagaaagcc
actcccggcgaactggtcaagggcactcccgcgcaacgcgttcccgctgaagctgtcgcc
agagcccccgaaaggaaggattga
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