Desulfovibrio subterraneus: LN040_15860
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Entry
LN040_15860 CDS
T08953
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb00300
Lysine biosynthesis
dsb00550
Peptidoglycan biosynthesis
dsb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LN040_15860
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LN040_15860
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dsb01011
]
LN040_15860
Enzymes [BR:
dsb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
LN040_15860
Peptidoglycan biosynthesis and degradation proteins [BR:
dsb01011
]
Precursor biosynthesis
Amino acid ligase
LN040_15860
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF8018
Motif
Other DBs
NCBI-ProteinID:
WBF67170
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All DBs
Position
3644941..3646389
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AA seq
482 aa
AA seq
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MTQVMTLEQLAEQIRTGLVSLHTDSRKVMPGDAFVAVPGASMDGGDFIGDALEKGAAYVV
CRERSMPADAGDARFVLHEDPQTALGILAGVKFSTTELSFPVVGVTGTNGKTTVTYMLEH
LFNAAGRRAGVIGTVSYRWPGTELEAKMTTPDCLKVHALLARMAVAGVDGVFMEVSSHAL
DQNRTAGVEYSGAILTNLTQDHLDYHGDMETYFQAKRRLFTSVPKAGKACVVNVDDPYGR
RLLPELPNGIGFTLHDVKIEGCRILSGEVLSCTVEGLHLRMTLDGESWELVSPMVGYHNA
SNLLAVQGMGRALGLSAEDMRGLEGFNGVPGRLERIPNAKGVHAFVDYAHTPDALENVLT
ALRRVGFERIITVFGCGGDRDRRKRPLMGEAVCHHTDVAVLTSDNPRTEDPVAILEDVKP
GLGGCTRVLIDPDRRKGIALAVAEARPGDCILVAGKGHEDYQIIGTQKFPFSDQAVLKEL
LG
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgacacaggtaatgacgttggaacagctggcggaacagatccgcaccggtctggtttcc
ctgcacacggattcgcgcaaggttatgcccggtgacgcgtttgtcgcagtgcccggtgca
tccatggacggcggcgacttcatcggcgatgcccttgaaaaaggggcggcgtatgttgtg
tgccgcgagcgcagcatgcctgcagatgcaggtgatgcccgctttgtgctgcatgaggac
ccgcagaccgcgctgggcattctggccggcgtcaagttcagcaccacagagctttcgttc
cccgtggtgggcgtgaccggaaccaacggtaaaactaccgtgacctacatgcttgagcat
cttttcaatgccgcaggccgcagggccggtgtcatcggcaccgtgagctaccgctggccc
ggcaccgagctggaagccaagatgaccactccggactgcctcaaggtgcacgcgcttctg
gcccgcatggccgtggcaggcgtggacggcgtgttcatggaagtctcctcgcacgcgctt
gaccagaaccgcacggcgggggtcgagtactccggtgccattctgaccaacctgacgcag
gaccaccttgattaccacggcgacatggaaacctattttcaggccaagcgccgcctcttc
acctcggttcccaaggccggcaaggcctgcgtggtgaacgtggatgatccctacggccgc
cgcctgctgcccgaactgcccaacggcatcggcttcacactgcatgacgtgaagattgaa
ggctgccgtattctcagtggcgaagtgctttcgtgcacagttgaaggtctgcaccttcgc
atgacccttgacggcgagagctgggaactggtttcgccgatggtcggctaccataacgct
tccaacctgctggccgtgcagggcatgggccgcgcgctcggcctgagcgcagaagacatg
cgcgggctggaaggcttcaacggcgttcccggcaggctggagcgcattcccaacgcgaag
ggcgtgcatgccttcgtggactacgcccacacccccgatgcccttgagaacgtacttacc
gccctgcgcagggtggggtttgaacgcatcatcaccgtgttcggctgcggcggcgaccgc
gaccgtcgcaagcgtcccctgatgggcgaggccgtgtgccaccacaccgatgtggccgtg
ctgacctccgacaacccccgcaccgaagatcccgttgccattctggaagacgtgaagccc
ggacttggcggctgcacccgcgtgctcattgaccccgatcgcagaaagggcattgcgctg
gccgtggcggaagcgcgtcccggcgactgcattctcgtggcaggcaaggggcatgaagac
taccagatcatcggtacacagaaatttcctttcagcgaccaggccgtattgaaggagctg
ctcgggtga
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