Drosophila sechellia: 6604950
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Entry
6604950 CDS
T01064
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
dse
Drosophila sechellia
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dse04131
]
6604950
Membrane trafficking [BR:
dse04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
6604950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
6604950
NCBI-ProteinID:
XP_032575291
LinkDB
All DBs
Position
3L:complement(8708704..8714953)
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AA seq
1645 aa
AA seq
DB search
MSYMEDCFAGASQEFLICITVHKAAQVGVTSGELYVRISLDKMTKSTKSFPNTENPFFNE
YFVFEFHCTLTELLRLTILFELKKHMTYKKNVVVGELLVDLHSVWNQTNHGYFKKWGRLE
APIGENQTLENAVAPHGYLQLDLAIVSQHSPVSYALGSEEQDTQSLNKWTVDHDFDDIEK
NLLTNVNTFAPSNIRYFVAFYRGYFIRQSNYMIQYRFHPFKGKTPVVKNTTTPVWNYEIN
FAWMYPSVAQRFLILIFTHEHLQWKCVAEFELCLEEIAFNGTPSLGPTYLHLYDPVNPMI
YVGRLLMELRSEMLTDSKPTHTLSSKTVPGLDETRFWHDDVYLIEFLPLMGHHILTSGTA
YKISARLAEHSSNVLEGQLRTPLDRFRSAMNSKSFRREAPFQSCMFRVRLPDNRAKYESD
FFMLDIVNYMRSELDTFKLFQRKYPHQDDEQAKCLKVIVNSILTRIKEGLDAHRFDHDVQ
PKRTTWDINRQLYLLDYFAKLPLELQHLKHKLRSCFLEHLDTSIGDVVNELQRLVAEMGS
LSSMARTQDEWPELVLTLSASGKDVGVCRLNAKLFLNLRNQDADQETLCWRLKSFSFKSA
GCSHTCPNCGCTTAIVSGCLAIVVERERKQFLSVVNKDWANIEPMLWQLNPEQTHFLCHV
YIHQAKVRPGGEKKNICDPHLRVLFADQACETYTSPGTLSPIWNAVITFNWVSLPGGIGL
YLRNPPLLSLEFYNSERSLPEDLVGMGSVAMSVISEDRASDSNWEDAGVFACSKNPLRKL
QRLKYLTPPPLKWVPIARKGTLQAEVLMSAEIIQISMEPTGQDDKKEPQLATGIPMAIRP
NMQNFVLEVFFVGLRNYTKSSMSSAGKRKINVMMGDLVLASGPSTARIRNSINFLVAYAS
GVVSLPDQQDYWPAIIATDVLLSGFSSESTLGAALIPNSSNFLQRDRTLKCVLKKDQAAV
EASTTVSVDEDEDDEDGEDELEWEEEETKPSRISSWWMRFLFALGLRSAPYANRHALRFH
DDLDDLEFVEEREFTWWTKFYNSMYWSAAEMCHEHKHRLVIYYEELEKQAQFGYLQDWAV
PVQLVHGVKFKKHGPPREDIYATLKLQLKLTPCQCPVLEDPGGGGDMVRNMSNPIHPRHQ
STLQSLGETVKLLVRVYVVQGVQMRPRDVKGDSDCYVKLFLGGKTFSDRAHFSPNHSNPV
FGRLFEMEATLPGDHMLQVMVYDHDKIKDEVIGQTNIDLEDRWRTRHRATVGLANEYTKS
GYNHWHDVKLPAEILIDLCQKRGIQAPYYYGNVIEVDGMLFGDETLISKDEELQERLSLA
VLKNMDKLPSFGYKLVPEHVETRSLCRDDFPNVEQGKLQLWIELFEANIYVPSPIDITPV
PPADFEVRVVVKNLVGIQAGDKNIFGKLMSDVYVIGWCEDEDKRQSTDIHYRSFAGDAAF
NWRMVFGLKYSPNEDLMVIRRKAGLLEEIEFKKPPIIYLQVWDKDVLTKDEYLAALELNL
SNMYAPYPAAQLCKPYPKKRKRINLFKRKVINGWFPLQSNAHPSQRSQATVQNGKMQLSI
EVCTEVEAVNRPAGRGQDPPMALEPPYRPDSSFNPLTHPCKSFRHILWPVIRKYVLWTLF
ILIVILGLVLFFSNLPAKLMTIPLE
NT seq
4938 nt
NT seq
+upstream
nt +downstream
nt
atgagttacatggaggactgtttcgcaggtgcctcgcaggagtttctcatctgcattacg
gtgcacaaggcagcgcaagtgggagtgacctccggcgagctgtacgtgcggattagcctg
gacaaaatgacgaagagcaccaagtcctttccgaataccgaaaatcccttcttcaatgag
tacttcgtttttgagttccattgtacgctaaccgaactcctgcgcctaacgatccttttt
gagctaaagaaacacatgacctataagaaaaatgtggtagtgggtgagctgctggtggat
ctacacagcgtgtggaaccagaccaatcatggttacttcaagaagtggggtcgcctggaa
gcacctattggagaaaaccagaccctagaaaatgccgttgcacctcacggctatttgcaa
ctggatctggccattgtatcccagcatagtccagtgtcttatgccctcggatctgaggag
caagacacccaaagtctgaacaagtggacggtggatcatgattttgatgatatcgagaag
aatctcctgaccaacgtgaacaccttcgccccaagtaatattcgatacttcgtcgccttt
taccggggatacttcatcaggcagagcaactacatgattcaatacagattccatcctttc
aagggcaaaacgccggtggtcaagaacacgacgacgcccgtgtggaactacgagatcaac
tttgcctggatgtatccgtcggtggcccagcgtttcctcatcctaatttttacccatgag
catctgcaatggaaatgcgtggctgagttcgaattgtgtcttgaggagatcgcgtttaat
ggaactccttctctgggacccacctacttgcatctctacgatcctgtcaatcctatgatc
tatgttggtcgtcttctaatggaacttcggtctgaaatgctaacggattccaagccaaca
cacacgctttcctccaagacggtgccaggcttggatgagacccgtttctggcatgacgat
gtctatctgattgagtttcttccactaatgggtcaccacatcctgacctcgggtacggca
tacaagatctcggcgagattagcagaacacagctcgaacgtgctggagggtcagctaagg
acaccattggatcgattccggtcggcaatgaactcaaagagtttccggcgggaggcacct
ttccagtcctgcatgtttcgagtccgtttgccggacaatcgagccaagtacgagagtgat
ttcttcatgctggatatagtcaattatatgcgttcagaactggacaccttcaagctcttt
caacgaaaatatccacaccaggatgatgagcaggccaaatgcctgaaggtcattgtgaac
agcattttgaccagaatcaaggagggtttagatgcccaccggttcgaccacgacgtgcaa
ccaaagcgcaccacctgggacatcaaccggcagctgtacctcctggactatttcgccaag
ttgccactggaacttcaacatcttaagcataaactacgcagctgctttctggaacacctg
gacacctccattggtgatgtggttaatgagcttcagcgtttggtagccgagatgggatcc
ctttccagtatggcacgcacacaggacgaatggccagagttggtgcttaccttaagtgca
agcggtaaagatgtgggtgtttgccgattgaacgccaagctctttttgaatctacgaaat
caggatgcggatcaggagaccctttgttggcgtctaaagagcttttccttcaagtccgcg
ggctgttcgcacacctgccccaattgtggttgcaccacggccatagtatcaggatgttta
gccattgttgtggaacgggagcgaaaacagtttctttctgttgtcaataaagattgggcc
aacattgagcccatgttgtggcagctgaatcctgaacagacacacttcctctgtcacgtt
tacatacaccaagccaaagtacgtcctggtggtgaaaaaaagaacatctgtgacccccat
ctgagagtcctgtttgccgaccaggcctgtgaaacgtatacgtctcccggaactctatcg
cccatttggaatgctgtgatcacctttaactgggtgtcactaccaggaggtattggtctc
tatctaaggaaccctcctcttctttccttggaattctacaattccgaacgcagtctacca
gaggaccttgttggcatgggaagcgtggccatgagtgttattagcgaggatcgggcaagt
gattccaattgggaggatgcaggagtattcgcttgctcaaagaatccgttgcgaaagcta
cagagattgaagtacctgactccacctcctctcaaatgggtgccaatagctagaaaagga
actctacaagcagaggttttgatgtcagccgagatcatacaaatctccatggaacccact
ggtcaggatgataaaaaggaaccacaacttgcaacgggaattccaatggccatcaggcca
aatatgcagaattttgtcttagaggttttctttgtgggtctgcgcaattacaccaagagc
agcatgagttctgctggtaagcggaaaatcaatgtgatgatgggtgatctggtcctggcc
agtggaccctccacagcacgcatccggaacagcataaactttttggtggcctacgcctct
ggagtggtaagtttgccagatcaacaggattactggccggcaattatagccaccgatgtc
cttctctccggattcagcagcgagtccactctgggagcagctctcatacccaactcatca
aatttcctgcaacgcgacaggaccctcaagtgtgtgttaaaaaaagaccaggccgctgtg
gaagcttccaccacggttagtgtggatgaagatgaagatgacgaggatggggaagatgaa
ctggaatgggaagaggaggagaccaaaccatccagaatcagcagctggtggatgcggttt
ctcttcgcgttgggtctgcgttcagctccctatgccaatcgtcacgctttaaggttccat
gatgatttggatgacctcgaatttgtcgaggagcgggagttcacctggtggactaagttc
tacaactcaatgtattggagtgcggccgaaatgtgccacgaacacaagcaccgcctggtt
atctactacgaagagctggagaagcaggcccagtttggatacctccaggattgggcagtt
cccgtccagttggttcatggcgtgaagtttaagaagcatggtccacccagagaagatatc
tatgccactttaaagctgcaactcaagttgactccatgtcagtgtccggttcttgaggat
cccggaggtggtggcgacatggttcgcaacatgtcaaatcccatacatcctcgacatcag
tccacattacagtcacttggtgagaccgtaaaacttttggtacgtgtttatgtagtccag
ggcgttcagatgcgtcctcgagatgtgaaaggagactccgattgctatgtgaagctgttc
ctgggcggcaagacgttttccgatagagcccatttctcacccaaccacagtaatccagtt
ttcgggcgtctatttgaaatggaggctacgctgccaggagatcacatgctgcaagtgatg
gtatatgatcatgacaagatcaaggacgaggtgatcggtcagacaaacatcgatctggag
gatcgctggcgaactaggcatcgtgccacagtgggtttggccaacgagtacacaaagagt
ggctataaccactggcacgacgttaagttgcccgcggaaattctcatagatctgtgccag
aaaaggggcattcaggcaccctactattatggtaatgtaattgaggtggacggaatgctt
tttggagacgaaactttgatctcaaaagatgaggagctgcaggagagacttagcttagcc
gtgcttaagaatatggataagttgccatccttcggttacaaattggttccggaacatgtg
gaaacccgctccctctgccgcgatgattttccaaatgttgaacagggcaaactccaactg
tggatagagctgttcgaggcgaacatctatgtgcccagtcccatcgatataacccctgtg
ccgcccgcggatttcgaggtgcgtgttgtggttaagaatctggtcgggattcaggcgggc
gacaaaaacatttttggcaaactaatgagcgacgtttacgtgataggatggtgcgaggat
gaggacaagcgccaatcgaccgatatccattaccgctcatttgcaggagatgcggcattt
aattggcgcatggtcttcggcctcaagtattcccccaacgaggacctgatggtaatccgg
cgaaaggcggggctgctggaggaaatcgagttcaagaagccgcctattatctatctgcag
gtgtgggataaggatgtgctaaccaaggatgagtacctggccgccctggagctcaatctc
tccaacatgtacgcgccgtatccagctgcccagttatgtaagccctatcccaagaagagg
aagcgcatcaatctcttcaagcgcaaggtcatcaacggctggtttccgctgcaaagtaat
gcacatccatcgcaacgcagccaggccacagttcaaaatggcaaaatgcagctgagcatc
gaagtctgcacggaagtggaggccgtcaaccggccggctggtcgtggacaggacccaccg
atggccttggagcccccttacagaccggacagctcgttcaatccactaacgcatccttgc
aaatcctttcggcacatcctctggccagtcattcgaaagtatgtcctgtggactttgttc
atattgatcgttatcctgggactggtgctcttcttttccaatctgcccgccaaactcatg
accattccactggagtaa
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integrated database retrieval system
