Drosophila sechellia: 6618742
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Entry
6618742 CDS
T01064
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
dse
Drosophila sechellia
Pathway
dse03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6618742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dse03041
]
6618742
Spliceosome [BR:
dse03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
6618742
Complex C
U5 SnRNP specific factors
6618742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Dynamin_N
Septin
Ras
TniB
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
6618742
NCBI-ProteinID:
XP_002043000
UniProt:
B4IGZ0
LinkDB
All DBs
Position
3R:26431236..26434771
Genome browser
AA seq
975 aa
AA seq
DB search
MDSDLYDEFGNYIGPDLDSDEEDDQSIYGQPDVQDDPEDAMDEDEVEPQEDEDKEVTAVV
LHEDKRYYPSAVEVYGPDVETIVQEEDAQPLDKPLIEPVKKLKFQIKEQDMQETTYDMEF
MADLMDTPPLIRNVALVGHLHHGKTTFVDCLIRQTHPQFETMEERQLRYTDTLFTEQERG
CSIKATPVTLVLQDVKQKSYLLNIFDTPGHVNFSDEATAAMRMSDGVVLFIDAAEGVMLN
TERLLKHAVQERQAITVCINKIDRLILELKLPPQDAYFKLKHIVEEVNGLLSTYGAPDDN
LLVSPILGNVCFASSLYGFCFTLKSFAKLYADTYEGVAYLDFAKRLWGDMYFNSKTRKFT
KKQPHNSAQRSFVEFILEPMYKLIAQVVGDVDTTLSDTLAELNVRVSKEEMKSNIRPLLR
LVCNRFMGDCSGFVDMCVEHIKSPLENAKRKVDHIYTGPKEGDIYRDMISCNQYGTLMVH
SSKMYPNDDCTFFQVLARIVSGTLHAGQEVRVLGENYTLQDEEDSRILQVGRLWVFESRY
KVELNRVPAGNWVLIEGIDQCIVKTSTIVDINVPEDLYIFRPLKFNTQSIIKIAVEPVNP
SELPKMLDGLRKVNKSYPLLSTRVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVAD
PVVAFCETVVETSSLKCFAETPNKKNKITMISEPLEKGLAEDIENGTVCINWNKKRIGEF
FQVNYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKNLLTAVKDSIVQGFQWGTREG
PLCEEPIRNVKFKILDGVIANEALHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVEVQ
APADCVSAVYTVLARRRGHVTQDAPVSGSPIYTIKAFIPAIDSFGFETDLRTHTQGQAFC
LSVFHHWQIVPGDPLDKSIIIRPLEPQQASHLAREFMIKTRRRKGLSEDVSINKFFDDPM
LLELARQDVLVNYPL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggattccgatttgtacgatgagtttggcaactatattggtcccgatctagacagcgac
gaggaagatgaccaaagtatttacggtcaacccgatgtgcaggatgatccagaggacgcc
atggacgaggacgaggtggagccgcaggaggacgaggacaaggaggtgaccgccgtggtt
ttgcacgaggataaacgatactatccgtcggcagttgaggtttacggcccggatgtggag
accattgtccaggaggaggacgcccagccgctggacaagccgctcatagagccggtgaag
aagctgaagttccagatcaaggaacaggacatgcaggagaccacctacgacatggagttc
atggccgatctcatggacactccgccgctcattcgcaacgtggctttagttggccacctg
caccacggcaagaccacctttgtcgactgcctcatccggcagacgcatccgcagtttgag
accatggaggagcgccagctgcgctacacggacaccctgttcacggaacaggaacgcggc
tgcagcatcaaggccacgccggtcacacttgtcctgcaggatgtcaagcagaagagctac
ttgctgaacatcttcgacaccccggggcatgtcaacttctcggacgaggccaccgccgcc
atgcgaatgagcgatggtgtcgtgctgttcatcgatgccgccgagggcgtcatgctcaac
acggagcggctgctcaagcacgcggtgcaagagcgccaagccatcaccgtttgcataaac
aagattgatcgcctcatcctggagcttaaattgccgccccaggacgcctactttaagctg
aaacacattgtggaggaagtcaatgggctgctgagcacatatggcgctccagatgacaat
ctcttagtttcgcccatcctgggcaacgtgtgcttcgccagctcgttgtatggcttttgt
ttcactctgaaatcctttgccaagctgtatgcagacacctatgagggagtggcttacctg
gactttgccaagcggctctggggcgacatgtacttcaacagtaaaacgcgcaagtttaca
aagaagcagccgcacaattcggcacagcgcagctttgtggaattcattttggagcccatg
tacaagctgatagcccaggtggttggcgatgtggacaccactttgtcggacactctggcc
gagctgaatgtgcgcgtctccaaggaggagatgaagtccaacataagaccactgctgcgt
ctcgtctgtaaccgattcatgggcgactgcagcggctttgtggacatgtgcgtggagcac
attaaatccccactggaaaatgccaagcgaaaggtggaccacatttacactggacccaaa
gagggtgacatttaccgggatatgatttcatgcaaccaatacggcactctgatggtgcac
agctccaagatgtatcccaacgatgactgtaccttcttccaagtgctggcgagaattgta
tctggtaccctacacgctggccaggaggtgcgtgtcctgggcgagaactacaccctgcag
gatgaggaagactctcgcattctgcaagtgggtcgcctgtgggtatttgagtctcgttac
aaggtggagttaaatcgagtacccgccggaaattgggtgctcatcgaaggcatcgatcag
tgtatcgtcaagacctccaccattgtggatattaatgttccagaagacctctacatattc
cggccactgaagttcaacacccagagcattatcaagattgctgtggagccagtgaatcca
tccgagcttcccaagatgttggatggcctccgcaaggtgaacaaatcctatccactcctc
tcgactcgagttgaagaatccggcgagcatgttattctgggcactggcgagctgtatttg
gattgtgtcatgcacgatctgcgtaagatgtactcggagattgacatcaaagtggcggat
cctgtggtggctttctgcgaaacagttgtggaaacgagttcgctgaaatgttttgccgag
acgccgaataagaaaaacaaaataaccatgatctcggagccgctggagaagggattggcc
gaggatattgagaacggaaccgtctgtataaactggaataaaaagcgcatcggcgagttc
ttccaggtcaactacgattgggatctgcttgcggcgcgttccatttgggccttcggtccc
gactccacgggtcccaatatcttggtcgacgacaccctgccctcggaagtggacaagaac
ctgctgaccgcggttaaggattcgattgtgcagggcttccaatggggaacgcgagaaggg
ccgctgtgcgaggagccaatccgtaatgtcaagtttaagattctcgatggcgtcatcgcc
aacgaggcgttgcatcgaggcggtggacagatcattccaacagcccgtcgagtggcatac
tcggcgtttttgatggccaccccacgtctgatggaaccgtatctgtttgtggaggttcag
gcgccggcagattgtgtatccgctgtttatacagtgctggctaggcgcagaggccacgta
acgcaggatgctcccgtgtcgggatctcccatctatacgatcaaagccttcatacccgcc
attgattcctttggatttgagacggatctccgcacgcacacccagggccaggccttctgc
ctttcggtgttccatcactggcagatagtgcctggcgatcccctggacaagagcatcata
atccggccactggagccgcagcaagcgtcccatttggccagagagtttatgatcaagacg
cgccgcaggaagggtctgtccgaggacgtgtccatcaacaaattcttcgacgatcccatg
ttgctggagctggcgcgccaggacgtgctggtcaactatcccctttag
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