Dinoroseobacter shibae: Dshi_0028
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Entry
Dshi_0028 CDS
T00612
Symbol
mutY
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Dshi_0028 (mutY)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsh03400
]
Dshi_0028 (mutY)
Enzymes [BR:
dsh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Dshi_0028 (mutY)
DNA repair and recombination proteins [BR:
dsh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Dshi_0028 (mutY)
Prokaryotic type
Dshi_0028 (mutY)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_4
HhH-GPD
EndIII_4Fe-2S
HHH
Motif
Other DBs
NCBI-ProteinID:
ABV91777
RoseoBase:
Dshi_0028
UniProt:
A8LJV1
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All DBs
Position
complement(31815..32909)
Genome browser
AA seq
364 aa
AA seq
DB search
MHKKIASDAAAAALSSTLLDWYDAHARVMPWRVGPAERAAGTRPDPYRVWLSEVMLQQTT
VAAVRDYFRAFTDRWPRVTDLAAAADADVMAAWAGLGYYARARNLLKCARVVTQDHGGRF
PDTAEGLRALPGIGPYTSAAIAAIAFDRPETVVDGNVERVMARLRGIETPLPPAKPELTE
AAAALTPDKRPGDYAQAVMDLGATICTPRNPACGICPWRDPCVARATGIAAELPRKLPKK
PKPTRFGLVYVARHPDGAWLLETRPDRGLLGGMLAYPSTDWTEEAPADAPPVAADWHDPA
LEVRHTFTHFHLRLALRTAITDAPPARGRFVPRAAFRPADLPTVFRKAHDLAAAHLDTGF
PSPL
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcataaaaaaatcgcgagcgacgcggcggcggcggcgctgagcagcaccctgctcgac
tggtacgatgcccatgcccgcgtgatgccctggcgcgtggggcctgccgagcgcgccgcg
ggcacgcgcccggacccctatcgcgtctggctctccgaggtgatgctgcaacagaccacc
gtggccgccgtgcgcgactacttccgcgccttcaccgaccgctggccccgggtcaccgac
ctggcggcggccgcggatgccgatgtcatggccgcctgggcggggctcgggtactacgcc
cgcgcgcgcaacctgctgaaatgcgcgcgggtggtgacgcaggaccatggcgggcgcttt
cccgacaccgccgaaggcttgcgcgccctgcccggcatcggcccctatacctccgccgcc
atcgccgcgattgccttcgaccggcccgaaacggtggtcgacggcaatgtcgaacgggtc
atggcccggctgcgcgggatcgaaacgcccctgccgcccgccaagccggaactgaccgag
gccgccgcggccctcacgccggacaaacgccccggcgactacgcccaggcggtgatggat
ctcggcgccacgatctgcaccccgcgcaaccccgcctgcggcatctgcccgtggcgggac
ccttgtgtcgcccgcgccaccggcatcgccgccgaactgccccgcaaactgccgaagaag
cccaaaccgacccgtttcgggctggtctatgtcgcgcgccacccggacggtgcctggctg
ctggaaacccgtcccgaccggggccttctgggcggcatgctcgcctatccctccaccgac
tggaccgaggaggcgcccgccgacgcccccccggtcgccgcggactggcacgacccggcc
ctcgaagtgcgccacaccttcacccatttccacctgcgcctggccctgcgcaccgcgatc
acggacgccccgcccgcaaggggccgcttcgtgccgcgcgccgcctttcgccccgccgat
ctgcccacggtgttccgcaaggcccatgacctcgcggcggcacatcttgacacaggcttc
ccttccccgctctga
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