Dinoroseobacter shibae: Dshi_0139
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Entry
Dshi_0139 CDS
T00612
Name
(GenBank) type I secretion system ATPase
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Dshi_0139
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsh02000
]
Dshi_0139
02044 Secretion system [BR:
dsh02044
]
Dshi_0139
Transporters [BR:
dsh02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Dshi_0139
Secretion system [BR:
dsh02044
]
Type I secretion system
Multiple protein transporter
Dshi_0139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_22
SMC_N
AAA_30
AAA_29
AAA_16
RsgA_GTPase
MMR_HSR1
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ABV91888
RoseoBase:
Dshi_0139
UniProt:
A8LKP5
LinkDB
All DBs
Position
complement(137186..138925)
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AA seq
579 aa
AA seq
DB search
MAPRTSPNAGKGLEELGAIRRANMPLFAWVFVFSIFVNALMLTGPLYMLQVYDRVLGSQS
EETLLALSVLVAFLFLMMGILDWARGRVLARAGARMQDTLDQRVFSASLRKSLRQGQTTA
STGLRDLESMQRLLSSPALLAVFDIPWTPLFVAAIFMFHPWLGYLALVGGTFLILVTVLN
QWLTSRPVSKANEASARAEMMSQQLAGGAETVESLGMRGAAFTRWSKVRAESLSETLTSS
DRTGGFSTLTKTFRLFLQSAMLGLGAYLVLQGQLTAGAMIAGSILMGRALAPIEMAIGQW
PLVQRAMKGRRDLIELLDAIPPDPERTPLPKPKARLVVEQLIVVPPGEAQAALRSVSFTV
SPGEACGVIGQSGAGKSTLARALTGIWPVAGGKIRLDGAALDQFGPDVLGTHIGYLPQQV
VLFDGTIAENIARLAPQPDAQAVVDAAKRADAHEMILKLPKGYDTMLLGSQTRLSGGQMQ
RIGLARALYGDPVLLVLDEPNSNLDNSGSQALNAAVARMKKDGKAVLIMAHRPAAIEQCD
TLLVLEGGSRKAFGPRDEVLKSMVSNHKEILKKAAGGVS
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcgccacgcacctccccgaacgcgggcaaggggctcgaagaactgggtgcgatccgt
cgcgccaacatgccgttgttcgcctgggtcttcgtgttctcgatcttcgtgaacgccctg
atgctgaccgggccactctacatgttgcaggtttatgaccgggtcctgggcagccagtcg
gaagagaccctgctggcgctgtcggtactggtcgcatttctgtttttgatgatggggatc
ctggattgggcccgcgggcgtgtgttggcgcgggccggggcgcgcatgcaggacacccta
gaccaacgggtgttttcggcgtcgttgcgcaaatctttgcgccaggggcagaccacggcg
tcgaccgggttgcgcgacctggagtcgatgcagcgactgttgtcttcgccggctcttctg
gcggtgttcgacattccgtggacgccgctcttcgtggccgcgatcttcatgtttcaccct
tggctgggctatctcgccctggtgggcgggacattcctgatcctggtgacggtgctgaac
caatggctgacaagtcgcccggtcagcaaggcgaacgaggcctcggcccgcgccgagatg
atgtcgcagcaactggccgggggcgcggaaaccgtcgaatcgctcggcatgcgcggcgcg
gccttcacacgctggagcaaggtgcgcgcggagtccctgtcggagacgctgacatcctcg
gaccggaccggcggcttttccaccctgaccaagacattccggctgttcctgcaatcggcg
atgctcgggcttggcgcatatctcgtcctgcaggggcaattgaccgccggggcgatgatc
gcaggctcgatcctgatgggccgggccctggcgccgatcgagatggcgatcggacaatgg
ccgctggtgcagcgggcgatgaagggacggcgcgacctgatcgagttgctggatgccatc
ccgcccgacccggagcggacccccctgcccaaaccgaaggcgcggttggtggtggagcag
ctgatcgtggtgcccccgggcgaagcgcaagcggccctgcggagtgtgagcttcacggtc
tcgcccggggaggcgtgcggggtgatcgggcaatcgggcgcgggcaaatcgaccctggcg
cgggcgctgaccggcatctggcccgtggcgggcggcaagatccggctcgatggcgcggcg
ctggaccagttcggcccggatgtgctgggcacccatatcggctacctgccgcaacaggtt
gtgctcttcgacggcaccattgccgagaacatcgcccggctggccccgcagcccgatgcc
caggcggtggtggatgccgccaagcgtgcggacgcccacgagatgatcctgaagctgccc
aagggctatgacacgatgttgctcggcagccagacccggctttcaggcgggcagatgcag
cggatcggcctggcacgcgcactctacggcgatccggtgctgctggtgctggacgagccg
aactcgaacctcgacaactccggcagccaggccttgaatgcggccgtggcgcggatgaaa
aaggatggcaaggcggtgctgatcatggcccaccggcccgcagcgatcgagcaatgcgat
acgcttctggtgctggagggcggctcgcgcaaggctttcgggccacgggacgaggtgctg
aaatccatggtgtcgaaccacaaggaaatcctgaagaaagccgctggaggcgtgtcatga
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