KEGG   Dinoroseobacter shibae: Dshi_0179
Entry
Dshi_0179         CDS       T00612                                 
Symbol
def1
Name
(GenBank) peptide deformylase
  KO
K01462  peptide deformylase [EC:3.5.1.88]
Organism
dsh  Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:dsh00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    Dshi_0179 (def1)
Enzymes [BR:dsh01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.88  peptide deformylase
     Dshi_0179 (def1)
SSDB
Motif
Pfam: Pep_deformylase
Other DBs
NCBI-ProteinID: ABV91928
RoseoBase: Dshi_0179
UniProt: A8LLB8
LinkDB
Position
183047..183610
AA seq 187 aa
MLRPGGAWITSTGMTIRPILIHPDPRLKKTVDPVAEITDEIRQLADDMLATMYDAPGIGL
AGPQVAAMTRIITMDCAPKDGEPDPMVLINPEIVWSSEEMNTYEEGCLSIPEMYADVERP
AEVEVRWTTLEGGDASARWGGLHATCVQHEIDHLNGKLFIDYLKPLKRQMITRKMVKLKR
ERARAEG
NT seq 564 nt   +upstreamnt  +downstreamnt
atgttgcgcccggggggggcgtggattacatcaaccggcatgaccattcgaccgatcctg
atccatcccgacccgcgcctcaagaagaccgtcgacccggtcgccgagatcaccgacgag
atccggcagctggccgatgacatgctggccaccatgtatgacgcgccgggcatcgggctg
gccgggccgcaggtggccgcgatgacgcggatcatcaccatggattgcgcccccaaggat
ggcgagccggacccgatggttctgatcaatcccgagatcgtctggtcctcggaagagatg
aacacctacgaggaaggctgtctgtcgatccccgagatgtacgccgatgtggagcgtccg
gcggaggtcgaggtccgctggaccacgctggagggcggggacgccagtgccaggtggggc
gggctccatgccacttgcgtgcagcatgagatcgaccacctgaacggcaagctgttcatc
gattatctcaagccgctgaagcggcagatgatcacccgcaagatggtgaaactgaagcgg
gagcgtgcccgtgccgagggctga

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