Dinoroseobacter shibae: Dshi_0329
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Entry
Dshi_0329 CDS
T00612
Symbol
ydaM
Name
(GenBank) diguanylate cyclase/phosphodiesterase
Organism
dsh
Dinoroseobacter shibae
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
Motif
Other DBs
NCBI-ProteinID:
ABV92078
RoseoBase:
Dshi_0329
UniProt:
A8LMA1
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Position
complement(317056..318645)
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AA seq
529 aa
AA seq
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MASARHAARAARGSGVLVSRFLDFFRSTGKQLFRDPALLAGFIPLFVALSYSTRDIRWLI
GASTLIPFLVLAIRAFDVVTSPKGGRDGLTGLPCRAALLEVLDKYFATPGASTRTAACMV
IDLDDFHSFNERWGREAADEVLRQTANRLRSAVRDNDLVVRLDADAFALYLAPSEGMTLD
STLSIADRIQRALSEPLVLHGLTAYVSASVGIALASKSPEPTAASLLVAAERAMVEARSQ
GAGALRLFSAEMQTEIRASHELAEDLAKALENGEIVAWFQPQVSTETGQVTGFEALARWD
HPSRGIVSPAEFLPAIEASGRTERLSEVMLYQGLKALVAWERGGFVIPSIGVNFAGLELR
NPHLIDKVKWELDRFGLTADRLSVEILETVITETDDDIVLRNIKALGELGCGIDLDDFGT
GHASISAIKRFKTSRIKIDRSFVTHIDKDGEQQRMVAAILTMAQQLQVESLAEGVETIGE
HSILAQLGCQHVQGFGIARPMPFEDTFAWLAEHERKRAPTPRIERQRGA
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgcccggcatgcggcgcgcgcagcaagaggcagtggcgtgttggtttcacga
tttctcgatttcttccgatccaccggcaagcagttgttccgcgaccccgcattgctggcc
gggttcatcccgctcttcgtggcgctgtcctattcgacgcgggacattcgttggctgatc
ggggccagcacgctcatccctttcctggttctggcgatcagggccttcgatgtggtcacc
tctccaaagggcgggcgcgacgggctgacgggcctgccctgccgcgccgcgttgctggag
gtgctggacaagtacttcgccacacccggggccagtacccggaccgcggcgtgcatggtc
atcgacctcgacgactttcacagtttcaatgaacgctggggacgtgaggctgcagacgag
gttctgcgccagaccgcgaatcgcctgcgcagcgccgtgcgcgacaacgacctcgtggtg
cggctcgatgcggacgccttcgcgctctacctcgcaccatccgaaggcatgacgctcgac
tccaccctgtcgatcgccgaccgcatccagcgcgccctcagcgagccgctggtgctgcac
gggctcaccgcttatgtcagcgcctcggtcgggattgcgcttgccagcaaatcacccgaa
ccgacggctgccagcctgcttgtcgccgcggagcgcgccatggtcgaagcccgttcccag
ggggccggtgccctgcggctgttctcggccgagatgcagacggagattcgcgccagccac
gaattggccgaagatctggccaaggcactggagaacggcgaaatcgttgcctggttccag
cctcaggtctccactgaaaccgggcaggtcacgggcttcgaggcgctggctcggtgggac
caccccagccgcggcatcgtgtccccggcggagtttctgccggccatcgaagcctccgga
cgcaccgaacgcctgagcgaggtcatgctctaccaggggctgaaagccctcgtcgcatgg
gagcggggcggcttcgtgatcccctccatcggtgtcaatttcgcggggctcgagttgcgc
aatccccacctgatcgacaaggtgaaatgggagctggaccggttcggcctgacggcagat
cggctgtcggtggaaatcctcgagaccgtcatcaccgagaccgatgacgacatagttctt
cgcaatatcaaggcgctgggggagcttggctgcggcatcgacctcgacgatttcggcacc
ggccatgcctccatcagtgcgatcaaacgcttcaagaccagccgcatcaagatcgaccgg
tccttcgtcacccatatcgacaaggatggggagcagcagcgcatggtcgccgccatcctg
acaatggcgcagcaactccaggtggagtcgctggccgaaggtgtcgagaccatcggtgaa
cactcgatcctcgcccagctcggctgccagcacgtacaggggttcgggatcgcgcggcca
atgcccttcgaggacacctttgcctggctggccgagcatgagcgcaaacgcgcccccacg
ccccggatcgaacgccaacgcggcgcttga
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