Dinoroseobacter shibae: Dshi_0330
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Entry
Dshi_0330 CDS
T00612
Symbol
ydaO
Name
(GenBank) PP-loop ATPase
KO
K14058
tRNA 2-thiocytidine biosynthesis protein TtcA
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dsh03016
]
Dshi_0330 (ydaO)
Transfer RNA biogenesis [BR:
dsh03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
Dshi_0330 (ydaO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
ABV92079
RoseoBase:
Dshi_0330
UniProt:
A8LMA2
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All DBs
Position
complement(318693..319556)
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AA seq
287 aa
AA seq
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MLDDADIHPLFHNAPGTTEFKKLRKRIIRNVREAIDLYGMVEREAREGTKPRWLVCLSGG
KDSYTLLAALTELQWRGLLPVEILACNLDQGQPGFPATVLPEFLERMGVPHRIEYQDTYS
IVMDKVPAGRTYCALCSRLRRGNLYRIAREEGCSAVLLGHHRDDILETFFMNLFHGGRLA
TMPPKLVNEEGDLFVLRPLAHVAEADCARFAKALDYPIIPCDLCGSQDGLQRQQVKALLD
GWEANSPGRRQVMFKALTNIRPSHMLDPNLFDFAGLGLADAFSENPK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacgacgccgacattcacccgctgtttcacaacgcgcccggcacgaccgagttc
aagaagctgcgcaagcggatcatccgcaatgtccgggaggcgatcgacctttacggcatg
gtcgagcgcgaggcccgcgaggggacgaagccgcgttggctggtatgcctgtccggcggc
aaggacagctacaccctgctcgcggctctgaccgaactgcaatggcgcgggttgctgccg
gtggagatcctggcctgcaacctcgaccaggggcagccggggtttccggcgacggtgctg
ccggagttcctggagcgcatgggcgtgccgcatcggatcgagtaccaggacacctattcc
atcgtgatggacaaggtgcccgcggggcggacctattgcgcgctctgctcgcggttgcgt
cggggcaacctctatcggatcgcgcgggaggaggggtgttcggccgtgttgctggggcat
caccgggacgacattctagagacatttttcatgaacctcttccacggcggacgccttgcg
accatgccaccgaaactggtcaacgaagagggcgatctgttcgtgctccggcccctcgcc
catgtggcagaggccgactgcgcgcgcttcgccaaggccctcgactacccgatcattccc
tgcgacctctgcggcagccaggacggcctgcaacgccagcaggtcaaggcccttctggat
gggtgggaggcgaactcccccggacggcgccaggtcatgttcaaggcgctgaccaatatc
cgcccgtctcacatgctcgacccgaacctgttcgactttgccgggctcgggcttgcggac
gcattttcggaaaatccgaagtag
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