Dinoroseobacter shibae: Dshi_0517
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Entry
Dshi_0517 CDS
T00612
Symbol
araF2
Name
(GenBank) ribose/xylose/arabinose/galactoside ABC-type transport system protein
KO
K02058
simple sugar transport system substrate-binding protein
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsh02000
]
Dshi_0517 (araF2)
Transporters [BR:
dsh02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative simple sugar transporter
Dshi_0517 (araF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
CoA_binding_2
Peripla_BP_3
ZNRF_3_ecto
Asparaginase_C
Motif
Other DBs
NCBI-ProteinID:
ABV92263
RoseoBase:
Dshi_0517
UniProt:
A8LNV5
LinkDB
All DBs
Position
complement(501109..502149)
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AA seq
346 aa
AA seq
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MLRRHFMAFASAASLALGAGAATAQEAPAPLDTPEEVTIALVRYLSTGDFFQAYLSGVET
QAAALGVNLRVFDSRQDAALQADMVDQAIALGVDGIIIQHGLTESMREAAQRAVDAGIKV
VAFDVNVENAAIPQVEQSDYLLGKLALEQAIKDNGDSFAAGYVYVPGIAPLDRRHAAWEE
VKTANPGITEEARIGTLDNPIANANANQARAALQANPNISVFFAPYNEFAKGVKIAADEL
GLSGEMSIYSADISTADIALMREPGSAWKATVATNPAVVGEVSVRALALMLAGEDPGASV
IVPPTLITQAFLNDNDIRNMEDLGAKMPQFQHADVAMADWMPLPAR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgctgagacgtcacttcatggcctttgcaagtgcggcaagtcttgcgcttggcgcgggc
gccgcaaccgcgcaggaggcacctgccccattggacactcccgaagaggtcactatcgcg
ctggtgcgctacctgtccaccggcgatttcttccaggcctacctgtcaggcgtcgaaacg
caggccgcggcacttggtgtgaacctgcgcgtgttcgacagtcgccaggatgccgccttg
caggcagacatggtcgaccaggccatcgcgcttggcgtggacgggatcatcatccagcac
ggtctcacggaatccatgcgggaagccgcacagcgcgcggtggatgcggggatcaaggtt
gtggcgttcgacgtgaatgtcgagaacgcggctattccgcaggtcgagcagtccgattat
ctgctcggcaagttggctctggaacaggcgatcaaggacaatggcgacagctttgccgct
ggctatgtctacgtcccgggcatcgcgccgctcgaccgccgccacgcggcctgggaagaa
gtgaaaactgccaatccaggcatcaccgaagaagcgcggatcggcacgctcgacaatccg
atcgcgaatgccaatgccaaccaggcacgcgcggctcttcaggccaacccgaacatctcg
gtcttcttcgccccctataacgagttcgccaaaggcgtgaaaatcgccgcggacgaattg
ggcctgagcggcgagatgagcatctactcggccgatatttccaccgcggacatcgcgctc
atgcgcgagccgggcagcgcttggaaggccacggttgccaccaacccggccgttgtcggg
gaagtgtccgtgcgcgcgcttgccctgatgctggccggcgaggatcccggcgcgtctgtg
atcgtgccgccgactctcatcacgcaggcttttctcaacgacaatgacatccgcaacatg
gaagacctcggtgccaagatgcctcagtttcagcacgcggatgttgcgatggccgattgg
atgcctctgcccgcacgctga
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