Dinoroseobacter shibae: Dshi_0617
Help
Entry
Dshi_0617 CDS
T00612
Symbol
clpB
Name
(GenBank) chaperone protein clpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
dsh03110
]
Dshi_0617 (clpB)
Chaperones and folding catalysts [BR:
dsh03110
]
Heat shock proteins
HSP100
Dshi_0617 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
IstB_IS21
TniB
AAA_18
AAA_7
RuvB_N
Mg_chelatase
bpMoxR
AAA_24
AAA_3
NACHT
T2SSE
AAA_25
Fez1
Torsin
NBD_SMAX1
Motif
Other DBs
NCBI-ProteinID:
ABV92363
RoseoBase:
Dshi_0617
UniProt:
A8LPP0
LinkDB
All DBs
Position
609070..611685
Genome browser
AA seq
871 aa
AA seq
DB search
MNMEKFTERSRGFLQAAQTIAMRENHQRMVPEHLLKALLDDEEGLAANLIARAGGDAARV
REALAAALDKLPKVSGDGAQTYLDQQTAKVLDEAEKLATKAGDSFVPVERILTALAVTKS
GAKTALEAGGVSAQALNGAINDIRKGRTADTASAESGYDALKKFARDLTEAAADGKIDPI
IGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIINGDVPESLRNKKLMAL
DMGSLIAGAKYRGEFEERLKSVLSEVTAAAGEIILFIDEMHTLVGAGKADGAMDASNLLK
PALARGELHCVGATTLDEYRKYVEKDAALARRFQPVMVQEPTVEDTVSILRGIKEKYELH
HGVRISDSALVAAATLSHRYITDRFLPDKAIDLVDEAASRLRMEVDSKPEELDALDREIL
QKQIEAEALRLEDDAASRERLASLEKDLSDLQQRSAEMTAQWQSERDKLASARDLKEHLD
KARAELEIAKREGNLARAGELSYGVIPGLEKQLAEAESGEGDVMVEEAVRPEQIASVVER
WTGIPTSKMLEGEREKLLRMEEEIGRRVIGQKTAVNAVANAVRRARAGLNDENRPLGSFL
FLGPTGVGKTELTKAVAEFLFDDDSAMVRIDMSEFMEKHAVARLIGAPPGYVGYDEGGVL
TEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLIVLTSNLGA
QALSQLPDGADASAAKRDVMDAVRAHFRPEFLNRLDETIIFDRLVRDDMDAIVDIQLARL
QKRLDARKLTLALDDAARSWLADEGYDPVFGARPLKRVIQRALQDQLAEMILAGDVTDGE
TIPVSAGPDGLLVGDRVSTSRRVPPQDAVVH
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggaaaagttcacggaacggtcgcgcgggttccttcaggctgcgcagacaatc
gcgatgcgggaaaaccaccagcgcatggtgcccgagcatctgttgaaggcccttctggat
gacgaggaaggcttggccgccaacctgatcgcccgtgcgggcggcgacgcggcccgcgtg
cgcgaggcgcttgccgcggccctcgacaagctgcccaaggtgtccggcgacggcgcccag
acctatctcgatcaacagaccgcgaaggttctggacgaggccgaaaagctcgcgaccaag
gccggggacagtttcgtgcccgtcgaacgcatcctgaccgcgcttgccgtgaccaagtcc
ggtgccaagaccgccctggaagcgggcggcgtctcggcgcaggcgctgaatggcgcgatc
aacgatatccgcaaggggcgcacggccgacaccgcgtcggcggaatcggggtatgacgcg
ctcaagaaattcgcgcgcgacctgaccgaggccgccgcggacggcaagatcgatccgatc
atcgggcgcgacgaggaaattcggcgcgcgatgcaggtcctcagccgccggaccaagaac
aaccctgtcctgatcggcgagccgggcgtcggcaagaccgccatcgccgagggcctcgcc
ctgcggatcatcaatggcgatgtgccggagtccctgcgcaacaagaagctgatggcgctg
gacatgggctcgctcatcgcgggcgcgaaataccgtggcgagttcgaggagcggttgaaa
tccgtcctgtccgaagtgacggcggcggcgggcgagatcatcctgttcatcgacgagatg
cacacgctcgtgggcgcgggcaaggcggatggggcgatggacgcctccaacctgctgaaa
ccggcgctggcgcggggcgagttgcactgcgtgggggcgacgacgctcgacgagtatcgc
aaatacgtggaaaaggacgcggcgcttgcccgccggttccagccggtcatggtgcaggag
cccacggtcgaggataccgtgtcgatcctgcgcggcatcaaggagaaatacgagttgcac
cacggtgtgcggatctcggactcggccctggtggcggcggcgacgctgagccatcgttat
atcaccgaccggttcctgccggacaaggcgatcgacctcgtggacgaggccgcgagccgg
ttgcgcatggaggtggacagcaagcccgaggagctcgacgcgctcgaccgcgagatcctg
caaaagcagatcgaggcggaggccttgcgcctggaggatgacgcggcctcgcgcgagcgg
ctggccagccttgaaaaggacctgtcggacctgcagcagcgcagcgccgagatgaccgcc
cagtggcagtccgagcgcgacaagttggcctcggctcgcgacctgaaggaacatctcgac
aaggcgcgcgccgagttggagatcgccaagcgggagggcaacctcgcccgcgcgggggag
ttgtcctatggcgtcattccggggctggagaagcagctggccgaagccgagagcggcgag
ggcgacgtgatggtcgaagaggccgtgcgtcccgagcagatcgcgagcgttgtcgaacgc
tggaccggtattccgacctccaagatgctggagggggagcgcgagaagctcttgcgcatg
gaagaggagatcgggcgccgggtgatcgggcagaagaccgccgtgaatgccgtggccaat
gcggtgcgccgggcgcgcgcggggctgaacgacgagaaccggcccttgggctcgttcctc
tttctcgggccgaccggggtcggcaagaccgagctgaccaaggccgtcgccgagttcctg
ttcgacgacgacagcgccatggtgcggatcgacatgtccgaattcatggagaaacacgcg
gtcgcgcgtctgatcggggcccctccggggtatgtcgggtatgacgagggcggggtgctg
accgaagcggtgcggcgccggccctaccaggtcgtgctgttcgatgaggtcgagaaggcc
cacccggacgtgttcaacgtgctcctgcaggtgctcgacgacggtgtgctgaccgacggg
caggggcgcacggtggacttcaagcagacgctgatcgtgctgacctcgaacctcggggcg
caggcgctcagccaattgcccgatggcgcggacgccagtgcggccaagcgggacgtgatg
gacgcggtgcgcgcccatttccggcccgagttcctgaaccggctggacgagacgatcatc
ttcgaccgcctggtgcgggacgacatggacgcgattgtggatatccagctcgcccggctg
cagaagcgcctggatgcgcgcaagctgaccctggcgctggacgatgcggcgcgcagctgg
cttgcggatgaaggctatgaccctgtgttcggggcccggcccctcaagcgcgtgatccag
cgggcgctgcaggaccagttggccgagatgatcctggccggggacgtgaccgacggcgag
accattccggtcagcgccgggccggacgggctgctggtcggcgacagggtgtcgacctcc
cgcagggttccgccgcaggacgccgtcgtccactga
DBGET
integrated database retrieval system
