Dinoroseobacter shibae: Dshi_0671
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Entry
Dshi_0671 CDS
T00612
Symbol
rsmC
Name
(GenBank) ribosomal RNA small subunit methyltransferase C
KO
K00564
16S rRNA (guanine1207-N2)-methyltransferase [EC:
2.1.1.172
]
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsh03009
]
Dshi_0671 (rsmC)
Enzymes [BR:
dsh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.172 16S rRNA (guanine1207-N2)-methyltransferase
Dshi_0671 (rsmC)
Ribosome biogenesis [BR:
dsh03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Dshi_0671 (rsmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTS
Methyltransf_25
Methyltransf_12
Methyltransf_11
Methyltransf_23
MTS_N
Methyltransf_31
FtsJ
Methyltransf_10
Cons_hypoth95
UPF0020
Eco57I
CMAS
PrmA
Motif
Other DBs
NCBI-ProteinID:
ABV92417
RoseoBase:
Dshi_0671
UniProt:
A8LQD1
LinkDB
All DBs
Position
676410..677411
Genome browser
AA seq
333 aa
AA seq
DB search
MTAQRLRLALDAGLLEWPDGPVLALRPPPGLEGLPEDRFQIVHGFRPDVTAWERRGALVQ
PQAEGAFATALVCVPRAKDHARALLAEAIGRVGPGGLIVLDGQKTDGVDSLVKLAKSLLT
GVEVYAKAHGKLLWGRVPDPLPDLAPLTPPLTSPEGWVTARAGFSAGAVDAGSALLAAHL
PARLQGDVLDLGAGWGYLAKAALASGQVTGMDLVEAEFDALEAARRNVDDPRARFLWEDA
AVFAPGKRYDAILCNPPFHTSRKADPAIGQMFLRTAARLLKPSGVLGLVANRHLPYEHTL
AECFGEAQPVTEAQGYKIFHARKPRQTGAARAS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgacagcacaacgattacggctggccctggacgcgggtcttctggagtggccagacggc
ccggtactcgccctgcgcccgccgcccgggctcgaagggctgcccgaggacaggttccag
atcgtccacggatttcgccccgatgttaccgcctgggaacgccgcggcgccctggtgcag
ccgcaggccgagggcgcgttcgcgacggccctcgtttgcgtgccccgggccaaggaccat
gcccgcgcgctgctggccgaggcgatcggccgggtcgggcccggcgggctgatcgttctg
gacgggcagaagaccgacggcgtcgacagcctggtgaagctcgcgaaatccctgctgacg
ggggtcgaggtctatgccaaggcccatggcaaactgctctgggggcgagtgccggacccc
ttgcccgatctggcgccgctgaccccgccgctgacatcgcccgagggctgggtgacagcg
cgcgcggggttttccgccggggcggtggatgcgggctcggcgctgctggcggcccatctg
cccgcgcggttgcagggcgacgtgctcgatctcggggccgggtgggggtatctggccaag
gccgcgcttgcctcggggcaggtcaccggcatggatctggtggaggccgagttcgacgcg
ctggaggccgcgcgccgcaatgtcgacgatccgcgcgcaaggtttctttgggaggacgcg
gcggtcttcgcccccggcaaacgctacgacgcgatcctgtgcaacccgcccttccacacc
tcgcgcaaggccgacccggcgatcggccagatgtttctgcgcacggccgcgcggctcttg
aagccctccggcgtgctcgggcttgtcgcaaaccggcatttgccctatgagcacaccctc
gccgagtgtttcggcgaagcccagcccgtgaccgaggcgcagggctacaagatcttccat
gcgcgcaagccgcgccagaccggcgccgcgcgcgcctcctga
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