Dinoroseobacter shibae: Dshi_0835
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Entry
Dshi_0835 CDS
T00612
Symbol
fadJ
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00071
Fatty acid degradation
dsh00280
Valine, leucine and isoleucine degradation
dsh00310
Lysine degradation
dsh00362
Benzoate degradation
dsh00380
Tryptophan metabolism
dsh00410
beta-Alanine metabolism
dsh00640
Propanoate metabolism
dsh00650
Butanoate metabolism
dsh00907
Pinene, camphor and geraniol degradation
dsh00930
Caprolactam degradation
dsh01100
Metabolic pathways
dsh01110
Biosynthesis of secondary metabolites
dsh01120
Microbial metabolism in diverse environments
dsh01200
Carbon metabolism
dsh01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Dshi_0835 (fadJ)
00650 Butanoate metabolism
Dshi_0835 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
Dshi_0835 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Dshi_0835 (fadJ)
00310 Lysine degradation
Dshi_0835 (fadJ)
00380 Tryptophan metabolism
Dshi_0835 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Dshi_0835 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Dshi_0835 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Dshi_0835 (fadJ)
00930 Caprolactam degradation
Dshi_0835 (fadJ)
Enzymes [BR:
dsh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Dshi_0835 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Dshi_0835 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Dshi_0835 (fadJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
NAD_binding_2
Sacchrp_dh_NADP
UDPG_MGDP_dh_N
F420_oxidored
Pyr_redox_2
2-Hacid_dh_C
NAD_binding_8
NAD_Gly3P_dh_N
MotA_ExbB
FAD_binding_3
RS_preATP-grasp-like
ApbA
Motif
Other DBs
NCBI-ProteinID:
ABV92580
RoseoBase:
Dshi_0835
UniProt:
A8LRD0
LinkDB
All DBs
Position
complement(844051..846264)
Genome browser
AA seq
737 aa
AA seq
DB search
MNDMTDFTMKTDADGVAIITWDVQGKSMNVMNQQGFEDLDALVDKALADDTVKGIIITSG
KDSFAGGMDLNVIAKMRDDAGDDPARGLFEGVMAMHGILRKIERAGMDPKTNKGGKPVAA
ALPGTALGIGLEIPLACHRIFAADNPKAKIGLPEIMVGIFPGAGGTMRVSRKLGAMQAAP
ILLEGKLFEPKKAKMAGIVDEVVPAEELLDAAKAWVLSAKDTDIVKPWDLKGYKFPGGAP
YHPAGFMTFVGASAMIHSKTMGVYPAAKALLSAVYEGAMVPFDTALKIEARWFTNVLMNP
SSSAMIRSLFINKEALEKGAVRPDVPDQKVKKVGILGAGMMGAGIAYVSANAGIEVVLID
AAQESADRGKAHAAGILDKGIARKKVTPEKKDEVLARITATTDYAALEGCDLVVEAVFED
PGVKAEVTAKAEAVIPGDAIFATNTSTLPISELAKASARPEQFIGIHFFSPVDKMLLVEI
IKGRQTGDVAVAKALDFVRQIRKTPIVVNDARFFYANRCIIPYINEGIRMVAEGVTPALV
ENAAKLVGMPLGPLQLVDETSIDLGVKIAKATKAAMGDAYPDGAVDEVLFWMADEGRLGR
KSNAGFYTYDEAGKRGLLWEGLADRYPAAKEQPELTAVQHRLLMAQVLEAVRALEDGVLM
DIREGDVGAILGWGFAPWSGGPLSWLDMIGAARAVEICDALTDTHGARFTTPALLREMAE
KGETFYGRFGAETRKAA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacatgaccgatttcaccatgaaaacggacgccgacggcgtcgccatcatcact
tgggacgtccagggcaaatccatgaacgtcatgaaccagcaagggttcgaggatctcgac
gcgctggtcgacaaggcgctggccgatgacaccgtcaaggggatcatcatcacctccggc
aaggacagctttgcgggcggcatggacctcaacgtcatcgccaagatgcgcgacgacgcc
ggcgacgacccggcccgtggcctcttcgagggcgtgatggccatgcacggcatcctgcgc
aagatcgagcgcgccgggatggaccccaagaccaacaagggcggcaaacccgtcgccgcc
gccctgcccggcaccgcgctcggcatcgggctggagatcccgctcgcctgtcaccggatt
ttcgccgccgacaaccccaaggccaagatcggcctgcccgaaatcatggtcggcatcttc
cccggcgcgggcggcaccatgcgggtgtcgcgcaagctgggcgcgatgcaggctgcgccc
atcctgctcgaaggcaagcttttcgagccgaaaaaggccaagatggccggcatcgtggac
gaagtggtgcccgcggaggagctgctcgacgccgccaaggcctgggtgctctccgccaag
gatactgatatcgtcaagccctgggacctcaagggctacaagttccccggcggcgcgccc
taccacccggcgggcttcatgaccttcgtcggcgccagcgccatgatccattccaagacc
atgggcgtctacccggcggccaaggcgctgctgagtgcggtctacgaaggggccatggtt
cccttcgacaccgcgctcaagatcgaggcgcgctggttcaccaacgtcctgatgaacccg
tcgtccagcgccatgatccgctcgctcttcatcaacaaggaggcgctggaaaaaggcgcc
gtccgtcccgacgtgcccgaccagaaggtgaagaaggtcggcatcctcggcgcggggatg
atgggcgcgggcatcgcctatgtctcggccaatgccgggattgaagtggtgctgatcgac
gccgcccaagagtccgcggatcgcgggaaggcccatgccgcgggcatcctcgacaagggc
atcgcgcgcaagaaggtcacgcccgagaagaaggacgaggtgctcgcccgcatcaccgcc
accacggactatgccgccctcgaagggtgcgacctggtggtcgaggcggtgttcgaagat
ccgggcgtcaaggccgaggtgaccgcaaaggccgaagccgtgatccccggcgatgcgatc
ttcgcgaccaacacctccaccctgccgatctcggagctggccaaggccagcgcccggcct
gagcagttcatcggcatccatttcttttcgcccgtggacaagatgctgctggtggagatc
atcaaggggagacagaccggcgatgtggccgtggccaaggcgctcgatttcgtgcgccag
atccgcaagacgcccatcgtggtcaacgacgcgcggttcttctacgccaaccgctgcatc
attccctacatcaacgaaggcatccgcatggtggccgagggcgtcaccccggcgctggtc
gaaaacgctgcgaaactggtgggcatgccgctggggccgctgcaactggtggacgaaacc
tccatcgacctgggcgtcaagatcgccaaggccacgaaagcggccatgggcgacgcctac
ccggacggcgccgtggacgaggtgctgttctggatggcggacgaaggccgcctgggccgc
aagtccaatgcgggcttctacacctatgacgaggcgggcaagcgtggtctgctctgggaa
gggctggccgaccgctacccggcggccaaggaacagcccgagctgaccgccgtgcagcac
cgcctgctcatggcccaggtgctggaggccgtgcgcgccctggaggacggcgtgctcatg
gacatccgcgagggcgacgtgggcgccatcctcggctggggcttcgcgccgtggtccggt
ggcccgctcagctggctcgacatgatcggcgccgcccgcgcggtggagatctgcgatgcg
ctgaccgacacccacggcgcccgcttcaccacgcccgcgctcctgcgcgaaatggccgag
aagggcgagaccttctatggccgcttcggggcggagacccgcaaagccgcctga
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