Dinoroseobacter shibae: Dshi_0852
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Entry
Dshi_0852 CDS
T00612
Symbol
msbA
Name
(GenBank) lipid A ABC exporter family
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsh02000
]
Dshi_0852 (msbA)
Transporters [BR:
dsh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Dshi_0852 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_16
AAA_22
AAA_15
AAA_29
RsgA_GTPase
ABC_ATPase
AAA_25
AAA_30
Zeta_toxin
AAA_18
AAA_23
DUF7027
AAA_5
DEAD
MMR_HSR1
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ABV92597
RoseoBase:
Dshi_0852
UniProt:
A8LRE7
LinkDB
All DBs
Position
863045..864853
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AA seq
602 aa
AA seq
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MARQSAPAAPQTAEEERAKSKNIGALKTLFPYIAPYRTLLVSAGVVLVLTAFLSLLLPMA
VRRVVDGFDARDTALLDQYFGAAIAVAALLALGTGLRYYLVTRLGERVVADIRKSVFDRT
LGMSPAFFEKIMTGEVLSRLTTDTTLILSVISSSVSIALRNFLILIGGMILMLLTSGKLT
GLVLLLVPLVLVPIVVLGRKLRKLSRINQDWIAASSGNASEALTSVQTVQAFTHVRESRA
EFDRMTELSFDSAKQRIGVRAAMTVIVIFLIFTGIVGVLWMGARDVRDALMTPGELVQFV
IYAIMVAGSVGALSEIWGELQRAAGATERLVELLTMKDTVEDPENPRPMPANCEGRITFE
DVSFTYPARPGTPVLDEIAFDIRPGETVALVGPSGAGKSTILQLLLRFFDPDEGRIKLDG
IDLRDARRDDFRRKIAFVPQDAVIFATSARENIRFGRPDATDAEVEAAAKAAAADEFLSR
LPDGYETFVGERGVMLSGGQKQRIAIARAILRDAPVLLLDEATSALDAESEQAVQHAVEQ
LSEGRTTLIVAHRLATVKKADRILVFERGRIVAEGTHDALVAQGGLYARLARLQFTAGLA
AE
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggcccgacaatccgcgcccgccgcgccacagaccgctgaagaagagcgcgcgaagtcg
aagaatatcggcgcgctcaagacgctgtttccctatatcgccccgtacaggaccctgctg
gtttccgcaggcgtggtcctcgttctcacggcgttcttgtcgctgctgctgccgatggcg
gtgcgccgggtggtggacgggttcgacgcgcgcgataccgcccttctggaccagtatttc
ggcgcggcgattgcggtggcagccctactcgccctcgggacgggcttgcgctactacctc
gtgacgcggctgggcgagcgggtcgtggccgacatccgcaagtcggtgttcgaccggacc
ctgggcatgagcccggccttcttcgagaagatcatgaccggcgaggtgctcagccgcctg
accacggacacgacgctgatcctgtcggtgatctcgtcctcggtgtcgatcgcgctgcgc
aacttcctgatcctgatcggcggcatgatcctgatgttgctgacttcgggcaagttgacg
gggctggtgctactccttgtgccgctggtgctggtgccgatcgtggttctggggcgcaag
ctgcgcaagctcagccggatcaaccaggactggatcgcggccagttcgggcaatgcctcc
gaggcgctgacatcagtgcagaccgtgcaggccttcacccatgtccgcgaaagccgcgcc
gagttcgaccgcatgaccgagctgtccttcgacagcgccaagcagcggatcggggtgcgc
gcggcgatgaccgtgatcgtgatcttcctgatcttcacgggcatcgtcggggtgttgtgg
atgggcgcgcgcgacgtgcgcgacgcgctgatgacgccgggggagctggtgcaattcgtg
atctatgcgatcatggtggcgggctccgtcggtgcgctgtccgagatctggggcgagttg
cagcgcgcggccggcgccaccgagcggctggtggagctcctgaccatgaaggacacggtg
gaggaccccgaaaacccccgcccgatgccggccaactgcgaggggcgcatcaccttcgag
gatgtcagcttcacctatcccgcgaggccggggaccccagttctggacgagatcgctttc
gatatcaggccgggcgagaccgtggcgctcgtgggcccgtccggtgcgggcaagtcgacc
atcctgcaactgctgctgcggttcttcgatcccgacgagggccggatcaagctggacggg
atcgacctgcgcgacgccaggcgcgacgatttccgccgcaagatcgccttcgtgccccag
gacgcggtgatcttcgccacctcggcgcgggagaatatccgcttcgggcggcccgacgcc
accgatgccgaggtggaggccgcggccaaggcggcggcagcggacgagtttctgtcccgt
ctgcccgatggctacgagaccttcgtgggcgagcggggcgtgatgctctccggtgggcag
aaacagcgcatcgcgattgcccgcgcgatcctgcgggatgcgcccgtgcttctgctggac
gaggcgacctcggcgctcgacgcggaatccgagcaggcggtgcagcacgcggtcgagcag
ctatccgaggggcgcacgaccctgatcgtggcacaccggctcgcgacggtgaaaaaggcc
gaccgcatcctggtgttcgagcggggccggatcgtggccgagggcacccatgatgccctg
gtggcccagggcgggctttatgcccgtctcgcccggctgcaattcaccgccggactggcg
gcggagtaa
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