Dinoroseobacter shibae: Dshi_0884
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Entry
Dshi_0884 CDS
T00612
Name
(GenBank) oligopeptide/dipeptide ABC transporter
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dshi_0884
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsh02000
]
Dshi_0884
Transporters [BR:
dsh02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Dshi_0884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_29
AAA_22
AIG1
Motif
Other DBs
NCBI-ProteinID:
ABV92629
RoseoBase:
Dshi_0884
UniProt:
A8LRH9
LinkDB
All DBs
Position
899031..900113
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AA seq
360 aa
AA seq
DB search
MTQPVLSIRNLTVDIPTRYAVLRPVDKVSYDIAPGEILGVVGESGAGKSMAGNAVIGLLT
PPAHISSGEVWLNGKRIDRLTPEQMRRVRGKDIGMVFQDPLTSLNPLLRIGDQLTETMLA
HLPISRAEAEERAVAALEEVGIPAARQRVNSYPHEFSGGMRQRVVIALALCAEPSLVIAD
EPTTALDVSVQAQIIALLKRLCRERGTAVMLITHDMGVIAEAADRVAVMYAGRLAELGPV
REVLTAPRHPYTFGLMGSTPLASKGLKRLHQIPGSMPRLGRLPPGCAFSPRCPRAQDKCR
HDPGPVIDADGAAACWFPMDGTEGIGGDATPPHGGARHLPDTSPTGARPGADAGFTGGGA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgacccaacccgtcctgtcgatccgcaacctgaccgtggacatccccacgcgctacgcg
gtgctgcggcccgtggacaaggtgtcctacgacatcgcgcccggcgagatcctgggcgtg
gtgggcgagagcggcgcgggcaagtccatggccgggaacgcggtgatcgggctgctgacc
ccgccggcccatatctcctccggcgaggtctggctcaacggcaagcggatcgacaggctc
acccccgagcagatgcgccgggtgcgcggcaaggatatcggcatggtcttccaggacccg
ctgacctcgctcaatccgctcctgcggatcggcgaccagctgaccgagaccatgctcgcg
catcttccgatctcccgggcggaggccgaggagagggcggtcgccgccctcgaggaggtc
ggcatcccagccgcgcgacagcgggtgaacagctacccgcacgagttttccggcgggatg
cgccagcgggtggtgatcgcgctcgcgctctgtgccgagccgtccctcgtgatcgcggac
gagccgaccaccgccctcgacgtctcggtgcaggcccagatcatcgcgctgctgaaacgg
ctctgccgcgaacgcgggaccgccgtgatgctcatcacccacgacatgggcgtgatcgcc
gaggccgccgaccgcgtcgcggtgatgtatgcgggccgcctggccgagcttggcccggtg
cgcgaggtgctcaccgccccgcgccatccctacaccttcgggctgatgggctccacgccg
ctggcatcgaaggggctcaagcggctgcatcagatccccggctccatgccacgcctcggg
cggctgcccccgggctgcgccttcagcccgcgctgcccccgggcgcaggacaagtgccgc
catgacccgggtccggtgatcgacgccgacggggccgcggcctgctggttcccgatggac
gggaccgagggcatcggcggtgacgcaacaccaccgcacggtggtgcccgacacttgccc
gacacaagtccgacaggggcccgacccggggccgacgccggttttacggggggcggggca
tga
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