Dinoroseobacter shibae: Dshi_0923
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Entry
Dshi_0923 CDS
T00612
Symbol
dacC1
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00550
Peptidoglycan biosynthesis
dsh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Dshi_0923 (dacC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dsh01002
]
Dshi_0923 (dacC1)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dsh01011
]
Dshi_0923 (dacC1)
Enzymes [BR:
dsh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Dshi_0923 (dacC1)
Peptidases and inhibitors [BR:
dsh01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Dshi_0923 (dacC1)
Peptidoglycan biosynthesis and degradation proteins [BR:
dsh01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Dshi_0923 (dacC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
PBP5_C
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
ABV92668
RoseoBase:
Dshi_0923
UniProt:
A8LRW1
LinkDB
All DBs
Position
complement(946801..947982)
Genome browser
AA seq
393 aa
AA seq
DB search
MGFLRLICLSLALGLGLAPAAQAAFETRAEAAYVVDVTTGTVLLEKNADVPLPPASMSKL
MTLYMLFEALEKNPAVTLDTTFRVSARAMAKGGSTMFLTERDRPTAEDLIKGIIVQSGND
ATVVVAEGLAGTEEAFSRLMTEKGAAIGLTQSTFTNSSGWPDPQHRMSMRDLGILTQRII
EDYPEYYGYFAMSEWGFDGRAPQNRFNRNPLLKLDIGADGLKTGHTQEAGYGLVGSAQQG
ARRIIFVITGLETDRARAEESERIVSWAFRQFVEKDMAEAGRHLADLPVWVGEAETVGLV
SPEDIRPLVPMVASGSLVAEIEADTPIAAPITAGQQLAELVITGPEMEPQRYPLVAETDV
AKGGAWVRMQAAAEVLYRELTREDAPDAPQAAN
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgggatttctgcgcctgatctgcctgagcctcgccctcggactcggccttgcccctgcc
gcccaggcggcgttcgagacccgcgccgaggcggcctatgtggtcgacgtcaccaccggc
accgtcttgctcgaaaagaacgccgacgtgcccctgccgcccgccagcatgtccaagctg
atgacgctctacatgctgttcgaggcgctggagaagaacccggccgtcaccctcgacaca
accttccgcgtctcggcccgcgccatggccaagggcggctcgaccatgtttctgaccgaa
cgcgaccgtcccaccgccgaagacctgatcaagggcatcatcgtgcagtcgggcaacgac
gccaccgtggtcgtcgccgaggggctcgcgggcaccgaagaggcgttctcccgcctgatg
accgagaagggcgcggccatcgggttgacccagtccaccttcaccaactcgtcgggctgg
cccgatcctcagcaccgaatgagcatgcgggatctcgggatcctgacccaacggatcatc
gaggactatcccgaatattacggctatttcgccatgtccgaatggggctttgacgggcgt
gcgccgcaaaaccggttcaatcgcaacccgttgctgaagctggacatcggtgccgacggg
ttgaagaccgggcacacgcaagaggccggatatggccttgtcggctcggcccagcagggc
gcgcggcggatcatcttcgtgatcaccgggctggagaccgaccgggcgcgggccgaggaa
tccgaacgtatcgtcagctgggccttccgccagttcgtggaaaaggacatggccgaggcg
ggacgccacctcgccgacctgcccgtctgggtcggggaggccgagaccgtcggccttgtc
tcccccgaagatattcgcccgctggtgcccatggtcgcctcgggcagcctcgtcgccgag
atcgaggccgacacccccatcgccgcccccatcacggcaggccagcagctggccgagctg
gtgatcacgggcccggagatggagccgcagcgctatccgctggtggccgaaaccgacgtg
gccaagggcggggcctgggtgcggatgcaggctgcggccgaggtgctctaccgcgagctg
acccgcgaggatgcgcccgacgcgcctcaggccgcgaactga
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