KEGG   Dinoroseobacter shibae: Dshi_0995
Entry
Dshi_0995         CDS       T00612                                 
Name
(GenBank) transcriptional regulator
  KO
K03717  LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
dsh  Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:dsh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dsh03000]
    Dshi_0995
Transcription factors [BR:dsh03000]
 Prokaryotic type
  Helix-turn-helix
   LysR family
    Dshi_0995
SSDB
Motif
Pfam: HTH_1 LysR_substrate HTH_30 DUF1598 HTH_5 HTH_24
Other DBs
NCBI-ProteinID: ABV92737
RoseoBase: Dshi_0995
UniProt: A8LSC3
LinkDB
Position
complement(1025066..1025971)
AA seq 301 aa
MADLNYNHLRYFWAVAHDGNLTRTAARLNLSQSALSVQIRKLEDRLGFALFERRGRALLL
TEAGQIALDHADTIFAAGDDLVATLRETGARRQVLRVGAQSTLSRNFQIAFLRPLLGRED
VEVVLRSGTVEELLRGLDALNHDVLLTNQPPLQDAGTPYRAQELGAQQVSLIGTPARAQA
GEASVEAHLRAHPVILPLQSSLIRAGFDALTAGYDFPIRIAAEVDDMALLRLLAREDLGL
AVLPPIVVRDELQSGELVELAPLPALRETFFAVTRPRRFPNPLLADLLAARPLPEADPAL
R
NT seq 906 nt   +upstreamnt  +downstreamnt
atggcagatctgaactacaaccacctgcggtatttctgggccgtggcccatgacgggaac
ctcacgcgcacggccgcgcggctgaacctgtcgcaatcggcgctgtcggtgcagatccgc
aagctggaagatcggctgggctttgccctgttcgagcggcggggccgcgcgctgctgctg
acggaggcggggcagatcgcgctggatcacgcggacaccatcttcgcggcgggcgacgac
ctggtggcgaccctgcgggagaccggcgcgcggcggcaggtgctgcgcgtgggggcgcaa
tcgaccctgtcgcggaacttccagatcgcgtttctacgccccctcttggggcgcgaggat
gtggaggtggtgctgcggtccggcacggtggaggagctgctgcgcgggctcgatgcgctg
aaccacgacgttctgctgaccaaccagccgccgttgcaggatgcgggcacgccctaccgc
gcgcaggagctgggcgcgcagcaggtcagcctgatcggcactccggcccgggcgcaggcg
ggggaagcctcggtcgaggcgcatctgcgggcccatccggtgatcctgcccctgcagtcg
agcctgatccgggcggggttcgacgcgctgaccgcgggctatgacttcccgatccgcatc
gcggcggaggtggacgacatggcgctcctgcgcctgctcgcgcgggaggatctgggcctt
gcggtgctgccgccgatcgtggtgcgcgacgagttgcagagcggcgagctggtggagctg
gcccccctgcccgccctgcgcgagacgtttttcgcggtcacgcggccccggcgctttccg
aaccctctgctcgccgatctgctggccgcgcggcccctgcccgaggcggacccggcgctg
cgctag

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