KEGG   Dinoroseobacter shibae: Dshi_1126
Entry
Dshi_1126         CDS       T00612                                 
Name
(GenBank) type II secretion system protein E
  KO
K02283  pilus assembly protein CpaF [EC:7.4.2.8]
Organism
dsh  Dinoroseobacter shibae
Pathway
dsh02020  Two-component system
Brite
KEGG Orthology (KO) [BR:dsh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Dshi_1126
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:dsh02044]
    Dshi_1126
   02035 Bacterial motility proteins [BR:dsh02035]
    Dshi_1126
Enzymes [BR:dsh01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Dshi_1126
Secretion system [BR:dsh02044]
 Type II secretion system
  Tight adherence (Tad) export apparatus
   Dshi_1126
Bacterial motility proteins [BR:dsh02035]
 Pilus system
  Pilus assembly proteins
   Dshi_1126
SSDB
Motif
Pfam: T2SSE DEAD ABC_tran AAA_29 AAA_22 Microtub_bd AAA_19 AAA_16 FtsK_SpoIIIE AAA_23 Zeta_toxin AAA_28 AAA_15 AAA_2 AAA_30 AAA_7 nSTAND_NTPase5 ATP_bind_1 CbiA AAA_18 nSTAND3 AAA_SelU DUF87 Septin
Other DBs
NCBI-ProteinID: ABV92868
RoseoBase: Dshi_1126
UniProt: A8LHS1
LinkDB
Position
complement(1151449..1152903)
AA seq 484 aa
MFAKYRKDAPAKPRPPAIAAGAIATEPAPGSGPETAKPKMRPKPKPETAPATPEAQDKEA
RRQQKLNELKVTLHKQLLEELNLSALESASEKELRAEIAQIVTESLATLSVALNKDERRT
LYEELYDEVRGLGPLEPLLKDEDVNDILVNGPHRVFIEKAGKLQLSDVKFRDEKHLLRII
DKIVSAVGRRVDEQNPYVDARLADGSRFNAMVGPIACDGSLVSIRKFKKDKLGIDELVNF
GAFSEEMAVYLQAAVACRLNVIVSGGTGSGKTTTLNALSSFIDNSERILTIEDTAELQLQ
QVHVGRMESRPANVEGKGAVTQRDCLRNALRMRPDRIIVGETRGEEVIDMLQAMNTGHDG
SMTTIHANSARDGVSRLENMVAMAGIEMPIRALRAQISSAVNLIVQASRLQDGSRRMVSI
TEITGMEGDIISMQEVFRYQRTGLLPDGKIKGHFTATGVRSHYSERFKQWGYDIPASIYE
PTKE
NT seq 1455 nt   +upstreamnt  +downstreamnt
gtgtttgccaagtaccgaaaagacgcgccggcaaagccacgccctcctgcgatcgcggcg
ggcgcaatcgcgaccgagcccgcgccaggctcgggtccggagacggccaagcccaagatg
cgtccgaagcccaagcccgaaacagcccccgccacgccggaagctcaggacaaggaagcc
cggcgccagcagaagctgaacgagctcaaggtgaccctgcacaaacagctgctcgaagaa
ctgaacctgtcggcactggaaagcgcgagcgagaaagaactgcgcgcagagatcgcccag
atcgtcaccgaatcgctcgcaaccctgagcgtcgccctgaacaaggacgaacgccgcacc
ctttatgaagagctttacgacgaagtgcgcggtctcggcccgctcgagcccttgctgaag
gacgaggatgtcaacgacatcctggtgaacggaccgcaccgcgtcttcattgaaaaggcg
ggcaaacttcagctttcagacgtaaaattccgggacgagaaacatctgctccggatcatc
gacaagatcgtctccgccgtggggcggcgtgttgatgaacagaacccctatgtcgacgcg
cgcctcgcggacggctcgcggttcaacgccatggtcgggccgattgcctgcgacggaagc
ctggtgtcgatccggaagttcaagaaggacaagctgggaattgatgagctggtcaatttc
ggcgccttttcggaggaaatggcggtctatctgcaagccgccgtcgcgtgtcggctgaac
gtgatcgtgtccggcgggacgggttcgggcaagacgaccacgctaaatgccctgagttcc
ttcatcgacaattccgaacgtatcctgaccatcgaggataccgcggaactccagttgcag
caggtgcatgtgggccggatggaaagccggcccgcgaatgttgagggcaagggcgccgtg
acccagcgtgactgtctgcgcaacgccctgcggatgcgcccggaccggatcatcgtgggc
gagacccgtggcgaggaggtgatcgacatgctccaggccatgaataccggccatgacggg
tcgatgaccacgatccacgcaaactccgcccgggacggggtcagtcgactggaaaacatg
gtggccatggccgggatcgagatgcccatccgggctttgcgggcacagatctcctcggcc
gtgaacctgatcgtgcaggcctcgcgcctgcaggacggatcgcgccggatggtgtcgatc
accgagatcaccgggatggagggggacatcatctccatgcaggaggtgttcagataccag
cgcacaggtctgctgcccgacggcaagatcaagggtcacttcactgcaaccggcgtgcgc
tcgcactactcggagcgcttcaagcaatggggctatgacattccggcttcgatctacgag
ccgacaaaggaatag

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