Dinoroseobacter shibae: Dshi_1196
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Entry
Dshi_1196 CDS
T00612
Symbol
dctD
Name
(GenBank) two component, sigma54 specific, transcriptional regulator
KO
K10126
two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Dshi_1196 (dctD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
dsh02022
]
Dshi_1196 (dctD)
Two-component system [BR:
dsh02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
Dshi_1196 (dctD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
AAA_5
HTH_8
AAA
AAA_16
AAA_3
AAA_2
DUF6716
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ABV92938
RoseoBase:
Dshi_1196
UniProt:
A8LI84
LinkDB
All DBs
Position
complement(1235704..1237050)
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AA seq
448 aa
AA seq
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MSAAPETILFVDDEEPLRHAAAQTLQLAEFDVACFAEAEAALPRIARDFPGILVTDIRMP
GMDGTTLMARALEIDPEFPVILVTGHGDVDLAVQSMRDGAYDFLEKPYAPSRLVASVRRA
LDKRRLTLDNRQLRAAMGRRDPVEARLTGRSAVMVALRQQLRAVAGTDADVLIVGDTGTG
KEVAARALHRASTRSTGPFQHINCAALPADLIESELFGHEAGAYPGAMRARFGKFEAARG
GTVFLDEIDSLPLPLQAKLLHAIQNRTVTRLGSNDPVHLDIRFVAASKKDLEAEAAAERF
RADLLYRLNVVTVGLPPLAERREDIPLLFAQLATEAAARYKQPAPEISGAILTALAARDW
PGNVRELRNAADRYVLGLDLALTNTAEGASMGLAERMAAHEKALIAASLAAHGGRLKDTY
AALNLSRKALYEKMQKHGLSRDTFAEED
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagcgcccgagaccattctctttgtcgatgacgaggagcccctgcgccacgcg
gcggcgcaaaccctgcaactggcggaattcgacgtcgcgtgttttgccgaggccgaggcc
gccctgccccggatcgcccgcgatttccccggcattctggtcaccgacatccgcatgccc
ggcatggacggcacgacgctgatggcccgcgcgctggagatcgacccggagtttccggtg
atcctcgtgaccggccacggcgacgtggacctggcggtgcagtccatgcgcgacggggcc
tatgattttctggaaaaaccctacgcacccagccgtctggtcgccagcgtgcgccgggcg
ctcgacaagcgccgcctgaccctcgacaaccgccagctgcgcgccgccatgggccgccgc
gacccggtggaggcccggctcaccgggcgcagcgcggtgatggtcgccctacgtcagcag
ctgcgcgcggtggcgggcacggatgcggatgtgctgatcgtgggggacacgggcacgggc
aaggaggtcgcggcccgcgcgctccaccgcgccagcacccgcagtacggggcctttccag
catatcaactgcgccgccctgcccgccgacctgatcgagagcgagctttttgggcatgag
gccggcgcctatcccggggcgatgcgcgcgcggttcggcaagttcgaggccgcgcggggc
gggacggtgttcctggatgagatcgacagtttgcccctgccgctccaggccaagctgctg
cacgcgatccagaaccggacggtgacgcggctcggctcgaacgatccggtgcatctcgac
atccgcttcgtcgccgccagcaagaaggacctcgaagccgaggccgccgcggagcgattt
cgggccgacctgctctaccggctgaacgtggtgacggtggggctgccaccgctggcggag
cggcgggaggatattccgctgctgttcgcgcagctcgcgaccgaggccgcggcgcgctac
aagcagcccgcgccggagatctcgggcgcgatcctgaccgcgctcgcggcccgcgactgg
cccggcaacgtgcgcgagctgcgcaatgccgccgaccgctacgtactggggctggatctt
gcgctgaccaacaccgccgaaggcgcgtccatggggttggccgagcggatggcggcccat
gagaaggcgctgatcgccgcgagcctcgcagcccatggcgggcggctcaaggatacctac
gcggcgctcaacctttcgcgcaaggcgctctacgagaagatgcagaagcacgggctgtcc
cgagacaccttcgccgaggaagactga
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