Dinoroseobacter shibae: Dshi_1197
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Entry
Dshi_1197 CDS
T00612
Symbol
dctB
Name
(GenBank) integral membrane sensor signal transduction histidine kinase
KO
K10125
two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:
2.7.13.3
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Dshi_1197 (dctB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
dsh01001
]
Dshi_1197 (dctB)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
dsh02022
]
Dshi_1197 (dctB)
Enzymes [BR:
dsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Dshi_1197 (dctB)
Protein kinases [BR:
dsh01001
]
Histidine kinases
NtrC family
Dshi_1197 (dctB)
Two-component system [BR:
dsh02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
Dshi_1197 (dctB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
dCache_1
HATPase_c_5
COG5_N
DUF2935
DUF4446
Motif
Other DBs
NCBI-ProteinID:
ABV92939
RoseoBase:
Dshi_1197
UniProt:
A8LI85
LinkDB
All DBs
Position
complement(1237047..1238915)
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AA seq
622 aa
AA seq
DB search
MSDALAPPPAASPRLIPALAVAVLLSGLVAVAAFPRIERYFLTEAAERAAATLSLTVEGL
NGALRRYAPLPALVAERPDLAALLRQPENTALQARINEDLRQTAYAIGASDVYLMDISGL
TLAASSYRKTLSFVGRSFSYRPYFTQALDGGLGRYFALGTTSGERGYFYAAPVEDNARIT
GVVAVKFTVDGFEETWRAGPATVLVRDLQGVVFMSSRPDWHFRALAPLTDAARARIEAAR
QYPLSEVTHLPTEITPLSEGAELWSIATPRGEAESYVARTARISDAGWDVTILLPTAPAR
QQALQMMAIAMLLTLLLVMAAAIYQQRRARLLERMETQRAAQAELEARVTQRTADLNLAN
RQLQQEVVERRQTEQRLRKTQAELVQAGKLAALGQMSAALSHEFNQPLAAVKSYAENAMT
FLDRDRVPEARENVTRISAMTDRMASISKHLRNFARRPQEEVGAVRLDAVIEDALSVMQV
RLKQTGAAVDYTPPEGPVWVRGGHVRLQQVVVNLLSNALDAMTHTPAPRVTLRIIARDGA
HMLEVRDIGPGIAPEAAETMFDPFFTTKAPGGGLGLGLSISYNIVRDFDGTLEAENAPGG
GAVFRLVLPAAAASRAAGTAAG
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgcgctcgcccctccccccgccgcctcgccccggctgatccccgccctggcg
gtggcggtgctgctctccggactcgtggcagtggcggcctttccgcggatcgaacggtat
ttcctgaccgaggccgccgagagggccgcggccacgctcagcctgacggtggaggggctg
aacggcgccctgcgccgctacgcccccctgcccgcgctggtggccgagcggcccgacctc
gcggccctgctgcgccagcccgagaacaccgccctgcaggcccggatcaacgaggatctg
cgccagaccgcctatgcgatcggggcctcggacgtgtacctgatggacatttccgggctg
accctggcggccagcagctatcgcaaaacactgtccttcgtgggccgcagcttcagttac
cggccctatttcacccaggcgctggatggtgggctgggccggtatttcgcccttggcacc
acctccggtgagcgcggctatttctacgccgccccggtcgaagacaacgcgcgcatcacc
ggcgtggtggctgtgaaattcaccgtggacgggttcgaggaaacctggcgcgcaggcccc
gccacggttttggtgcgcgacctgcagggcgtggtcttcatgtcctcgcgcccggactgg
catttccgcgcgctcgcccccctgaccgacgccgcgcgcgcccggatcgaagccgcgcgg
cagtatccgctgtcagaggtcacgcacctgcccaccgagatcacgcccctgtcggagggc
gcggagctgtggtccatcgccacgcccaggggcgaggccgaaagctatgtcgcccgcacc
gcccggatcagcgacgcgggctgggacgtgacgatcctgctgcccacggcgcccgcgcgc
cagcaggcgctgcagatgatggccatcgccatgctgctgaccctgctgttggtgatggcc
gccgcgatctaccagcagcgccgcgcccgcctgctggagcggatggagacccagcgcgcc
gcccaggccgaattggaggcccgcgtcacacagcgcaccgcggatctgaacctggccaac
cggcagctgcagcaggaggtggtcgagcgccgccagaccgagcagcgcctgcgcaagacg
caagccgagttggtgcaggccggcaagctcgccgccctggggcagatgtcggcggccctc
agccacgagttcaaccagccgctggcggcggtgaagtcctatgccgagaatgccatgacc
ttcctcgaccgcgaccgggtgcccgaggcgcgcgagaacgtcacgcggatctcggccatg
accgaccggatggcgtcgatctccaagcacctgcgcaacttcgcccgccgcccgcaggaa
gaggtgggcgcggtgcggctcgacgcggtgatcgaggacgcgctgtcggtgatgcaggtc
cggctgaagcagaccggcgcggcggtggactacaccccgccagaggggcccgtctgggtg
cgcggcggccatgtgcggctgcaacaggtggtggtcaacctgctcagcaacgcgctggat
gcgatgacccacacacctgcgccccgcgtcaccctgcggataatcgcgcgcgacggggcc
catatgctcgaagtccgtgacatcggccccggcatcgcgcccgaagccgccgagaccatg
ttcgatccgttcttcaccaccaaggcgccggggggcgggctcgggctggggctgtcgatc
tcctacaatatcgtgcgcgacttcgacggcacgctggaggccgagaatgcccccgggggc
ggtgcggtcttccggttggtcctgcccgccgcggccgcctcccgcgccgccgggaccgcg
gcgggatga
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