Dinoroseobacter shibae: Dshi_1349
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Entry
Dshi_1349 CDS
T00612
Name
(GenBank) ABC transporter related
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
dsh03012
]
Dshi_1349
Translation factors [BR:
dsh03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
Dshi_1349
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
ABC_tran_CTD
RsgA_GTPase
AAA_29
AAA_30
AAA
SbcC_Walker_B
DivIC
AAA_23
DLIC
AAA_13
Motif
Other DBs
NCBI-ProteinID:
ABV93091
RoseoBase:
Dshi_1349
UniProt:
A8LIX7
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Position
complement(1400718..1402574)
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AA seq
618 aa
AA seq
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MLRIDDISYSVEGRPLLEHASAVIPSGHKVGLVGRNGTGKTTLFRLIRGELTLDTGEITL
PRGARIGGVSQEVPGNEVSLLNTVLAADTERAGLMAEAETATDPGRIAEIQTRLADIDAW
SAEARASSILRGLGFTEPETHQPCSAFSGGWRMRVALAAVLFSQPDLLLLDEPTNYLDLE
GALWLEAYLARYPHTVLIVSHDRGLLNRAVGGILHLEDRKLTFYTGPYDQFARQRAEKRA
LQAAAARKQDAKRAHLESFVNRFKAKASKAKQAQSRVKMLEKMETIRVPEDAARTVFTFP
TPEELSPPIVATEGASVGYDGTAVLRGLSLRIDQDDRIALLGRNGEGKSTLSKLLAGRLE
AMDGTLTASNKLRIGFFAQHQVDELRVEETPLQHLLRVRPDEGQARLRARLAGFGLMAAQ
AETEVGRLSGGQKARLSLLLATLDAPHLLILDEPTNHLDIESREALVEALTAYTGAVILV
SHDMHLLSLVADRLWLVKDGHVAPYEDDLEAYRQMLLTPDKPRKPKAAPETAPKRPSRDA
ILALRAEARKCEERVKKITEMQEKLSKKLADPALYEDAKAGELETWNRKYAEVMDGLDRA
EAMWMAALEKLEKAEKAA
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgctacgcatcgatgacatctcctattcggtcgaggggcgcccgctgctcgaacatgcc
tccgcggtgatccccagtggtcacaaggtcggcctggtggggcgcaacgggaccggcaag
accacgcttttccggctgatccggggcgagctgacgctcgatacgggcgagatcaccctg
ccccgcggcgcgcggatcggcggggtcagccaggaggtgccgggcaacgaggtgtcgctg
ctgaacacggtgctggccgccgacaccgaacgcgcgggcctgatggcggaggccgagacc
gccaccgacccgggccggatcgccgagatccagacgcggctcgcggatatcgacgcctgg
tcggccgaggcgcgcgcgtcgtccatcctgcgcggtctgggcttcaccgagcccgagacg
caccagccgtgctcggccttctcgggcggctggcggatgcgggtggcgctggcggcggtg
ctgttctcgcaacccgacctgctgctgctggacgagccgaccaactatctcgacctcgaa
ggggcgctctggctggaggcgtatctcgcccgctatccgcacacggtgctgatcgtctcc
cacgaccgggggctgctgaaccgcgccgtgggcgggatcctgcatctcgaggaccgcaag
ctcaccttctataccggcccctatgaccagttcgcccgccagcgcgccgagaaacgcgcg
ctgcaagccgccgcggcgcgcaaacaggacgccaagcgcgcccatctcgagagcttcgtg
aaccggttcaaggccaaggcgtcgaaggccaagcaggcccagagccgggtcaagatgctg
gaaaagatggagacgatccgcgtccccgaggatgccgcgcgcacggtcttcaccttcccc
acccccgaggaactcagcccacccatcgtggcgaccgagggggcctcggtcggctacgac
gggacggccgttttgcgcgggctgtccctgcggatcgaccaggacgaccggatcgcgctg
ctgggccgcaatggcgagggcaagtcgaccctgtccaagctgctcgccgggcggctggag
gcgatggacggcacgctgaccgcgtcgaacaagctgcgcatcgggttcttcgcccagcac
caggtggacgagttgcgggtcgaggaaaccccgctgcagcacctgctgcgcgtgcgtccc
gatgaaggccaggccaggctgcgcgcgcggctggcgggcttcgggctgatggccgcacaa
gccgagaccgaggtcggacgcctgtcgggcgggcagaaggcgcggctgtcactgctgctg
gcgacgctggacgcgccgcatctgctgatcctggacgagccgacgaaccacctggatatc
gaaagccgtgaggcgctggtcgaggccctgaccgcctatacgggggctgtgatcctggtg
agccacgacatgcacctgctgagcctggtggccgaccggctgtggctggtcaaggacggc
catgtggcgccttacgaggatgatctcgaggcctaccgccagatgctgctgacgcccgac
aagccgcgcaagcccaaggccgcccccgagaccgcgcccaaacgcccctcgcgcgatgcg
atcctggccctgcgcgccgaggcccgcaaatgcgaggaacgggtgaagaagatcaccgag
atgcaggaaaagctgtcgaaaaagctcgccgaccccgcgctttacgaggacgccaaggcg
ggtgagctggaaacctggaaccgcaaatatgccgaggtgatggacgggctcgaccgggcg
gaggcgatgtggatggccgcgctcgagaagctggagaaggccgaaaaggccgcctga
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