KEGG   Dinoroseobacter shibae: Dshi_1363
Entry
Dshi_1363         CDS       T00612                                 
Symbol
pyrD1
Name
(GenBank) dihydroorotate dehydrogenase family protein
  KO
K17723  dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
Organism
dsh  Dinoroseobacter shibae
Pathway
dsh00240  Pyrimidine metabolism
dsh00410  beta-Alanine metabolism
dsh00770  Pantothenate and CoA biosynthesis
dsh01100  Metabolic pathways
Module
dsh_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate
Brite
KEGG Orthology (KO) [BR:dsh00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00240 Pyrimidine metabolism
    Dshi_1363 (pyrD1)
  09106 Metabolism of other amino acids
   00410 beta-Alanine metabolism
    Dshi_1363 (pyrD1)
  09108 Metabolism of cofactors and vitamins
   00770 Pantothenate and CoA biosynthesis
    Dshi_1363 (pyrD1)
Enzymes [BR:dsh01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.1  dihydropyrimidine dehydrogenase (NAD+)
     Dshi_1363 (pyrD1)
SSDB
Motif
Pfam: DHO_dh Fer4_21 Fer4 Fer4_7 Fer4_2 Dus Fer4_6 Fer4_10 Fer4_22 Fer4_9 NMO Fer4_17 LdpA_Fe-S-bd Fer4_4 Fer4_13 Fer4_8 His_biosynth Fer4_18
Other DBs
NCBI-ProteinID: ABV93105
RoseoBase: Dshi_1363
UniProt: A8LIZ1
LinkDB
Position
1416350..1417648
AA seq 432 aa
MADLRSDFVGVKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGFDPHVVNVNGPR
YGAVWGADRRLLGLNNIELITDRPLEVNLREIKQVKRDYPDRAMVVSLMVPCEEDPWKKI
LPLVEETGADAVELNFGCPHGMSERGMGSAVGQVPEYIEMVARWCKQHTRMPVIVKLTPN
ITDIRYPARAAHAGGADAVSLINTISSITSVNLDSFSPEPSIDGKGSHGGYCGPAVKPIA
LNMVAEIARDAETAGMPISGIGGVTTWRDAAEFLALGAGNVQVCTAAMTYGFKVVQEMIS
GLSQYLDEKDMTLDDLIGRATPNVTDWQYLNLNYVTKARIDQDSCIKCGRCYAACEDTSH
QAISMSADRVFEVIDAECVACNLCVNVCPVEDCITMVEMQPGEVDPRTGKVVEKDYANWT
THPNNPASQAAE
NT seq 1299 nt   +upstreamnt  +downstreamnt
atggcagacctgcgttcggacttcgtcggtgtgaaatcccccaaccctttctggctggcc
tccgcgccgccgacggacaaggagtacaacgtgcgccgcgccttcgaggccgggtggggc
ggggtggtatggaaaaccctcggcttcgacccccacgtggtcaacgtgaacggcccgcgt
tatggcgcggtctggggcgcggaccggcggcttctgggcctgaacaatatcgagctgatc
accgaccggccgctggaggtgaacctgcgcgagataaagcaggtcaagcgcgactatccg
gaccgggccatggtcgtgtcgctcatggtgccttgcgaggaggatccctggaagaagatc
ctgcccctggtcgaagagaccggcgccgacgcggtggagctgaacttcggctgcccccac
gggatgagcgagcggggcatgggatcggccgtgggccaggtgcccgaatacatcgaaatg
gtcgcgcgctggtgcaagcagcacacgcgcatgccggtcatcgtgaagctgaccccgaac
atcaccgatatccgctacccggcgcgggcggcccatgcgggcggcgcggacgcggtcagc
ctgatcaacacgatcagctcgatcacctcggtcaacctcgacagtttcagccccgagccg
agcatcgatggcaagggttcccacgggggctattgcgggcccgcggtcaagccgatcgcg
ctgaacatggtggccgagatcgcgcgggatgcggaaaccgccgggatgccgatctcgggg
atcggcggagtgacgacctggcgcgacgcggcggaattcctggccctcggggcaggcaac
gtgcaggtctgcaccgctgcgatgacctatggcttcaaggtggtacaggagatgatttcg
ggcctgtcccagtatctcgacgagaaggacatgaccctcgacgacctgatcggacgggcg
accccgaacgtcaccgactggcagtatctgaacctgaactacgtcaccaaggcccgcatc
gaccaggacagctgcatcaagtgcgggcgctgctatgccgcctgcgaggatacctcgcac
caggcgatttccatgagtgcggaccgtgtcttcgaggtgatcgatgcggaatgcgtggcc
tgcaacctgtgtgtgaatgtctgcccggtggaggactgcatcaccatggtcgaaatgcag
ccgggcgaggtcgatccgcgcaccggcaaggtggtcgagaaggactacgcgaactggacc
acgcatccgaacaatccggcgtcgcaagccgccgagtga

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