Dinoroseobacter shibae: Dshi_1401
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Entry
Dshi_1401 CDS
T00612
Name
(GenBank) ABC transporter related
KO
K01995
branched-chain amino acid transport system ATP-binding protein
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh02010
ABC transporters
dsh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Dshi_1401
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dshi_1401
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsh02000
]
Dshi_1401
Transporters [BR:
dsh02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Dshi_1401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
BCA_ABC_TP_C
AAA_23
AAA_29
SMC_N
Dynamin_N
RsgA_GTPase
AAA_27
MukB
MMR_HSR1
AAA_22
AAA_15
nSTAND3
AAA_30
ABC_ATPase
NB-ARC
AAA_25
AAA_28
P-loop_TraG
AAA_14
Motif
Other DBs
NCBI-ProteinID:
ABV93143
RoseoBase:
Dshi_1401
UniProt:
A8LJC1
LinkDB
All DBs
Position
complement(1454386..1455144)
Genome browser
AA seq
252 aa
AA seq
DB search
MGILEVKGVGKRFGGLQALGDVNLSIKENSVHAIIGPNGAGKSTLLNCLVGKLIPDTGSV
MFDGQSVLGRSPHEICQMGISRVFQTPEIFGDLTVMENVLIACFAKRDGSFELNAITSVR
SQSDMRDMAETILRDVNMLDKHAMHAASLSRGDKRRLEMAMCLVQQPRMLLLDEPTAGMA
RADTNNTIDLLKEIRDTRDITIAIIEHDMHVVFSLADRITVLAQGTPLVEDSPENIKGHP
KVREAYLGETAH
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgggaattctcgaagtcaaaggtgtgggcaagcggttcggcggccttcaggccctgggg
gacgtgaacctctcgatcaaggaaaactccgtccatgccatcatcggccccaacggggcg
ggcaaatccaccctgctcaactgcctggtgggcaagctgatacccgataccggctcggtg
atgttcgacgggcaatccgtgctgggccgctccccgcacgagatctgccagatgggcatc
tcccgcgtcttccagacgcccgagatcttcggcgacctgacggtgatggaaaacgtgctg
atcgcgtgtttcgccaagcgcgacggctcgttcgagctgaacgcgatcacctcggtgcgc
tcgcaatcggacatgcgcgacatggccgaaaccatcctgcgggacgtcaacatgctcgac
aagcacgccatgcatgccgcgtcgctctcgcgcggggacaagcggcggctggagatggcc
atgtgcctggtgcagcagccccgcatgctgctgctggacgagccgacggcgggcatggcg
cgggccgacaccaacaacaccatcgacctgctcaaggagattcgcgacacccgcgacatc
accatcgcgatcatcgagcatgacatgcacgtggtgttctcgctcgccgaccggatcacc
gtgctggcccagggcacccccctggtcgaggacagccccgaaaacatcaagggccatccc
aaggtgcgcgaagcgtatctcggcgagacggcgcactaa
DBGET
integrated database retrieval system
