Dinoroseobacter shibae: Dshi_1404
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Entry
Dshi_1404 CDS
T00612
Name
(GenBank) branched-chain amino acid ABC transporter
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh02010
ABC transporters
dsh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Dshi_1404
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dshi_1404
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsh02000
]
Dshi_1404
Transporters [BR:
dsh02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Dshi_1404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
ABV93146
RoseoBase:
Dshi_1404
UniProt:
A8LJC4
LinkDB
All DBs
Position
complement(1457511..1458866)
Genome browser
AA seq
451 aa
AA seq
DB search
MSNSEISRRRVLKTGAATGAGLALPTIFTGAAWSAGFTNEPTGSTVTLGFNVPQSGPYAD
EGADELRAYELAVEHLNGGGDGGMMSTFSSKALQGNGILGKKVEYVTGDTQTKSDAARAS
ARSMIEKDGAVMITGGSSSGVAVAVQALCQEAGIIFMAGLTHSNDTTGKDRKANGFRHFF
NSYMSGAALAPILAKNYGTDRKAYHLTADYNWGYTTEEAVRSSTEAMGWETVNTVLTPLT
QTDFSAYITPVLQSDADVLVLNHYGGNMVNSLTNAVQFGLRDRVVNGKNFEIVVPLYSRL
MAKGAGANVKGIFGSTNWHWSLQDAGSQAFVRSFGTKYGFPPSQAAHTCYVQALLYADAV
ERAGSFNPCAVDEALSDFEFDGMGNGPTLYRAADHQCFKDVLVVRGKENPTSEFDLLEIV
EVTPVEQVTYAPDHPQFGGAEATLGTCNPGA
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtctaattcggaaatcagccgccgtcgcgtgctgaagacaggcgctgccaccggcgca
ggcctggcactgcccaccatcttcaccggcgccgcctggtcggcgggcttcaccaacgag
cccaccggcagcaccgtcaccctgggcttcaacgtgccccagtccggcccctatgccgac
gagggcgccgacgagctgcgcgcctacgagctggcggtcgagcacctcaacgggggcggc
gatggcggcatgatgagcaccttcagctccaaggcgctgcagggcaacgggatcctcggc
aagaaggtcgagtatgtcaccggcgacacccagaccaagtccgacgccgcccgcgcctcg
gcccgctcgatgatcgaaaaggacggcgcggtgatgattaccggcgggtcgtcctccggc
gtggccgtggccgtccaggcgctctgccaggaggcgggcatcatcttcatggcgggcctc
acccattccaacgacaccaccggcaaggaccgcaaggccaacggcttccggcatttcttc
aactcctacatgtccggcgcggcactcgccccgatcctggccaagaactacggcaccgac
cgcaaggcctatcacctgaccgccgattacaactggggctacaccaccgaagaagccgtg
cgctcctccaccgaagccatgggctgggagacggtgaacaccgttctgacgccgctcacc
cagaccgacttctcggcctatatcacgcccgtgctgcagtcggacgcggatgtgctggtg
ctcaaccactacggcggcaacatggtgaactcgctgaccaacgcggtgcagttcggcctg
cgcgaccgggtggtgaacggcaagaacttcgagatcgtcgtgccgctctactcgcgcctg
atggccaagggcgccggtgccaacgtcaagggcatcttcggctccaccaactggcactgg
tcgctgcaggacgcaggctcccaggccttcgtgcgctccttcggcaccaagtacggcttc
ccgccgtcccaggccgcccatacctgctacgtgcaggcgctgctctacgcggacgcggtg
gagcgcgcgggctccttcaacccctgtgccgtggacgaggccctgtcggatttcgaattc
gacgggatgggcaacggcccgaccctctaccgcgccgccgaccaccagtgcttcaaggac
gtgctcgtggtgcgcgggaaggaaaacccgacctccgagttcgacctgctggagatcgtc
gaggtgacccccgtcgagcaggtgacctatgccccggaccacccccagttcggcggcgcc
gaggcgaccctcgggacctgcaacccgggcgcctga
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