Dinoroseobacter shibae: Dshi_1438
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Entry
Dshi_1438 CDS
T00612
Name
(GenBank) substrate-binding region of ABC-type glycine betaine transport system
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Dshi_1438
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsh02000
]
Dshi_1438
Transporters [BR:
dsh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
Dshi_1438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ABV93180
RoseoBase:
Dshi_1438
UniProt:
A8LJF8
LinkDB
All DBs
Position
complement(1493812..1494777)
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AA seq
321 aa
AA seq
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MKTTLKSFGLATAVSVLALPALASEKVSIGVPSWTGAQAIAHVLGEVVTSRIGGEVEYVP
GNNATIFQAMDQGRGDIDVHPDVWLPNQESFTNKYVDEAGTVTLSSNPYQGNQGFCVTQD
FAAAHDITDIADLGRPDVAALMDSDGNGRGEMWIGAPGWASANVNEVKVRDYGLLDFIEP
IRAEEAVKTARIKDSIAKGEGYAFYCYEPHAVWFMFDVTMLTEPTFDPAKYVMVQPSDDA
DWYEKSMVATKDALKDVQIAWSNSLVDRSPAIAEFFANFQLNAEDVSQLAYQISAQGRDP
AEVAAEWVNANSDRVDGWLGL
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaacgttgaaatccttcggactggccaccgcggtcagcgtgctggccctgccg
gcgctggcctcggagaaggtcagcatcggcgtgccgtcctggaccggcgcgcaggccatc
gcccatgtgctgggcgaggtcgtcacctcgcgcatcggcggcgaggtcgagtacgtgccc
ggcaacaacgccacgatctttcaggcgatggaccagggccgcggcgatatcgacgtccac
ccggatgtctggctgcccaaccaggagagcttcaccaacaagtatgtggacgaggccggc
accgtcaccctgtcgtcgaacccctaccagggcaaccagggcttctgcgtgacccaggat
ttcgccgcagcccatgacattaccgacatcgccgatctgggtcggccggacgtggccgcc
ctgatggacagcgacggcaacgggcgcggcgagatgtggatcggcgcgcccggttgggcc
tcggccaatgtcaacgaggtcaaggtccgcgactacggcctgctggacttcatcgagccg
atccgcgccgaggaggccgtgaaaaccgcgcgcatcaaggactccattgccaagggcgag
ggctatgcgttctattgctacgagccccacgcggtgtggttcatgttcgatgtcacgatg
ttgaccgagccgacctttgacccggcgaaatacgtcatggtgcagccctccgatgacgcg
gactggtacgagaagtccatggtcgcgaccaaggacgccctgaaggacgtgcagatcgcg
tggtcgaactccctcgtggatcgctcgcccgcaattgcggagttcttcgccaatttccag
ctgaatgccgaggatgtcagccagcttgcctaccagatcagtgcccagggccgtgatccg
gccgaggtcgcggcggaatgggtgaacgccaactccgaccgcgtcgatggctggctcggc
ctctga
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