Dinoroseobacter shibae: Dshi_1476
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Entry
Dshi_1476 CDS
T00612
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dsh03032
]
Dshi_1476 (gyrA)
03400 DNA repair and recombination proteins [BR:
dsh03400
]
Dshi_1476 (gyrA)
Enzymes [BR:
dsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Dshi_1476 (gyrA)
DNA replication proteins [BR:
dsh03032
]
Prokaryotic type
DNA Topoisomerases
Dshi_1476 (gyrA)
DNA repair and recombination proteins [BR:
dsh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Dshi_1476 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ABV93218
RoseoBase:
Dshi_1476
UniProt:
A8LK19
LinkDB
All DBs
Position
complement(1530153..1532894)
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AA seq
913 aa
AA seq
DB search
MTDTPEPPENTDETPPGGGRIQETISIAEEMKSSYLDYAMSVIVSRAIPDLRDGLKPVHR
RILYAMHETGNTHEKAYRKSARPVGDVMGKYHPHGDSAIYDALVRMAQDFSMSLPLLDGQ
GNFGSMDGDNPAAMRYTEVRMDKPAAALLADIEKETVDFQDNYDGKDREPTVLPARFPNM
LVNGAGGIAVGMATNIPPHNLGEVIDATLALIETPDLEVEDLMQYIPAPDFPTGGQILGR
GGARKAYLEGRGSVIIRAKTRIEELRKDRYAIVLDEIPYQVNKSSMIEKIAELVREKRIE
GIAHVQDESDRVGVRVVIELKRDATPEVVLNQLYRFTPMQTSFGCNMLALNGGRPEQLTL
KDFLSSFISFREEVVARRTAYDLRKARERSHVLCGLAVAVSNVDEVVATIRASADAAEAR
EKLMTRRWPAADIADYIRLIDDPTHTMNEDGTYNLSETQARAILDLRLQRLTQIGVKEVT
DELQELAAKIQEYLDILRSRSRIMAIISDELREVKDQFAVPRRTEITDWSGDMEDEDLIE
REDMVVTVTSGGYIKRTPLVEFRAQRRGGKGLAGMATKEDDVVTTLFVANTHTPLLVFTT
DGMVYKLKTWRLPSGGRNARGKALVNVLPIDPGTSIAAIMPVDRAEEDWADLQIVFATSA
GDVRRNALSDFTNVMRNGKIAMKLPEGVSLVKARICSEEDDVMLVTALGRAIRFRTTDVR
VFKGRDSTGVRGVRLAEGDRVVSMAVIRHFVADPQERAAYLKMRRAVAGLSEEAESEDED
TVEAGQLSPERYAEMSAAEDLILTITEGGTGKISSSHDYPVRGRGGQGVTAMDKAMRGGP
LVACFPVEIDDQIMLATSTGQSIRCPVDGISFRSRAAGGVKVFNTAPGEQVVSVAYIADR
GEADGDDPAPEAG
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgataccccggaaccccctgaaaacacagacgaaactccgcccggcggcggtcgg
atacaggaaaccatctcgatcgccgaagagatgaagagctcctatctcgattacgccatg
agcgtgatcgtgagccgggcgattccggacctccgcgacgggttgaaaccggtgcatcgg
cggatcctctacgccatgcacgagaccggcaacacccacgagaaggcctatcgcaaatcc
gcccgccccgtgggcgatgtgatgggcaagtaccacccgcacggcgattccgcgatctat
gacgccctggtgcggatggcacaggatttctccatgtccctgccgcttctggacgggcaa
ggcaacttcggctccatggacggcgacaaccccgccgccatgcgctacaccgaggtgcgg
atggacaaaccggcggcggcgcttctcgcggatatcgagaaggagaccgttgattttcaa
gacaattatgatggcaaggatcgcgagcccacggtccttccggcgcggtttccgaacatg
ctggtcaatggcgcgggcggcatcgccgtgggcatggcgaccaacattccgccccataac
ctgggcgaggtgatcgacgccacgctcgcgctgatcgagaccccggatctcgaggtcgag
gacctgatgcaatacatccccgccccggatttccccacgggcgggcagatcctcggccgg
ggtggcgcgcgcaaggcctatctcgaaggccgcggctcggtcatcatccgcgccaagacc
cggatcgaggagctgcgcaaggaccgctacgccatcgtgctcgacgagatcccctaccag
gtcaacaagtcctccatgatcgagaagatcgccgaactggtgcgcgagaagcggatcgaa
ggcatcgcccatgtgcaggacgagagcgaccgggtcggcgtccgcgtggtgatcgagctg
aaacgcgacgccacccccgaggtggtgctgaaccagctctaccgcttcaccccgatgcag
acctctttcggctgcaacatgctggcgctgaacggcggccggcccgagcagctgacgctc
aaggatttcctgagcagtttcatatccttccgcgaggaagttgtcgcgcgtcgcacggcc
tatgacctgcgcaaggcgcgcgagcggtcccatgtgctctgcggtctggcggtggcggtt
tcgaacgtggacgaggtggtggccaccatccgcgcctccgccgacgccgccgaggcgcgc
gagaagctgatgacccggcgctggcccgccgccgacatcgccgattacatccggctgatc
gacgacccgacccacacgatgaacgaggacggcacctacaacctgtcggaaacccaggcc
cgcgcgatcctcgatctgcggctgcagcgcctgacccagatcggcgtcaaggaggtgact
gacgagctgcaggagctcgccgcgaagatccaggaatacctcgacatcctgcgctcgcgc
tcccggatcatggcgatcatctcggacgagctgcgcgaggtgaaggatcaattcgccgtc
ccccgccgcacggagatcaccgactggtccggcgacatggaggacgaggacctgatcgag
cgggaggacatggtcgtcaccgtcacctccggcggctatatcaagcgcaccccactggtc
gaattccgtgcccaacggcgcggcggcaagggcctggcgggcatggccaccaaggaagac
gacgtggtcacgaccctcttcgtggccaacacccacacgccgcttctggtcttcaccacg
gacgggatggtctacaagctcaagacctggcgcctgccttcgggggggcgcaacgcgcgt
ggcaaggcgctagtcaacgtgctgccgatcgaccccggcacctccatcgcggcgatcatg
cctgtggaccgggccgaggaagactgggccgacctgcagatcgtcttcgccacctcggcg
ggcgacgtgcggcgcaacgcgctgagcgatttcaccaatgtcatgcgcaacggcaagatc
gccatgaaactgcccgagggcgtcagcctggtgaaggcgcggatctgttccgaggaggac
gacgtgatgctggtcacggccctgggccgcgcgatccgcttccggaccacggatgtgcgg
gtcttcaagggccgcgattcgaccggcgtgcgcggcgtgcggctggccgagggcgaccgg
gtggtgtcgatggccgtgatccggcatttcgtcgccgacccgcaggagcgcgccgcttac
ctgaaaatgcgccgcgccgtggccgggctctccgaggaggccgagagcgaggacgaggac
accgtcgaagccgggcagctgagccccgagcgctatgccgagatgtcggcggccgaggac
ctgatcctgaccatcaccgagggcggcaccggcaagatcagctcgtcccacgactacccg
gtgcgtggccggggcggccagggggtgacggccatggacaaggcgatgcggggcggcccg
ctggtggcgtgcttcccggtggagatcgatgaccagatcatgctggccacctccaccggc
cagtcgatccgctgtcccgtggatggcatcagcttccgctcccgcgccgccggaggcgtc
aaggtgttcaacaccgcgcccggggaacaggtggtctcggtggcctatatcgccgaccga
ggtgaagcggatggcgacgacccggcccccgaggcgggctga
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